RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA924320" and tax_phylum = "Nitrososphaerota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31415151 31415151 PRJNA924320_S_NODE_39736_length_178_cov_1.046512_g39594_i0 PRJNA924320 39736 178 1.046512 1.86279136 Candidatus Nitrosothermus koennekii 2927315 Archaea Archaea 58.2 1.85e-8   NR RMF28850.1 2927315 g39594 i0 44.4 1.8876404494382 54 30 91 0 17 178 82 135 RMF28850.1 MAG: 5-formyltetrahydrofolate cyclo-ligase [Candidatus Nitrosothermus koennekii] diamond 336 58.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Candidatus Nitrosocaldales Candidatus Nitrosocaldaceae Candidatus Nitrosothermus Candidatus Nitrosothermus koennekii
31478587 31478587 PRJNA924320_S_NODE_34736_length_188_cov_1.100719_g34594_i0 PRJNA924320 34736 188 1.100719 2.06935172 Candidatus Nitrosomaritimum aestuariumsis 3342354 Archaea Archaea 50.8 2.19e-5   NR MFB5604269.1 3342354 g34594 i0 34.4 2.93617021276596 61 39 97.3 1 188 6 10 69 MFB5604269.1 tRNA (adenine-N1)-methyltransferase [Candidatus Nitrosomaritimum aestuariumsis] diamond 552 50.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Candidatus Nitrosomaritimum Candidatus Nitrosomaritimum aestuariumsis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;