RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA924320" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA924320 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28414466 28414466 PRJNA924320_S_NODE_31086_length_196_cov_1.346939_g30944_i0 PRJNA924320 31086 196 1.346939 2.64000044 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 48.5 1.35e-4   NR MCX6134544.1 2049428 g30944 i0 45.9 0.933673469387755 61 31 91.8 2 183 4 131 190 MCX6134544.1 ankyrin repeat domain-containing protein [Ignavibacteriales bacterium] diamond 183 48.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
30309541 30309541 PRJNA924320_S_NODE_1232_length_807_cov_4.154354_g1137_i0 PRJNA924320 1232 807 4.154354 33.52563678 Ignavibacteria bacterium RBG_16_34_14 1798433 Bacteria Bacteria 66.2 5.16e-9   NR OGU74326.1 1798433 g1137 i0 32.4 2.79553903345725 210 126 74.7 7 20 622 3 205 OGU74326.1 MAG: hypothetical protein A2V93_04945 [Ignavibacteria bacterium RBG_16_34_14] diamond 2256 66.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium RBG_16_34_14
31921241 31921241 PRJNA924320_S_NODE_56737_length_161_cov_1.142857_g56595_i0 PRJNA924320 56737 161 1.142857 1.83999977 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 55.1 2.49e-7   NR MCB9207625.1 2049428 g56595 i0 50.9 1.97515527950311 53 25 96.9 1 161 6 82 134 MCB9207625.1 ion transporter [Ignavibacteriales bacterium] diamond 318 55.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32585800 32585800 PRJNA924320_S_NODE_2799_length_554_cov_3.394059_g2662_i0 PRJNA924320 2799 554 3.394059 18.80308686 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 48.1 0.00536   NR MCF8413947.1 2614255 g2662 i0 34.3 1.37545126353791 67 41 36.3 1 302 502 144 207 MCF8413947.1 hypothetical protein [Melioribacteraceae bacterium] diamond 762 48.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;