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contig_metadata

21 rows where bioproject = "PRJNA924320" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 21 ✖

bioproject 1

  • PRJNA924320 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
899291 899291 PRJNA924320_S_NODE_47021_length_167_cov_0.864407_g46879_i0 PRJNA924320 47021 167 0.864407 1.44355969 Halalkalicoccus jeotgali 413810 Archaea Archaea 134 4.86e-27   NTclustered gi|299123054|gb|CP002062.1| 795797 g46879 i0 90.909 0.994011976047904 99 9 59 0 1 99 1600914 1601012 Halalkalicoccus jeotgali B3, complete genome blastn 166 134 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
6356217 6356217 PRJNA924320_S_NODE_20505_length_229_cov_2.261111_g20363_i0 PRJNA924320 20505 229 2.261111 5.17794419 root 1 Root_unresolved Root_unresolved 52.8 0.02   NTclustered gi|1621075116|gb|CP031311.1| 699433 g20363 i0 100 0.244541484716157 28 0 12 0 202 229 2596409 2596436 Halobellus limi strain CGMCC 1.10331 chromosome, complete genome blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobellus Halobellus limi
8552075 8552075 PRJNA924320_S_NODE_23527_length_218_cov_1.195266_g23385_i0 PRJNA924320 23527 218 1.195266 2.60567988 root 1 Root_unresolved Root_unresolved 91.7 8.08e-20   NR MCU0859611.1 1906666 g23385 i0 65.2 36.3715596330275 66 23 90.8 0 21 218 3 68 MCU0859611.1 molecular chaperone DnaJ [Thermoplasmata archaeon] diamond 7929 92.4 0.992424242424242 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
22576533 22576533 PRJNA924320_S_NODE_6938_length_364_cov_2.422222_g6796_i0 PRJNA924320 6938 364 2.422222 8.81688808 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.035   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g6796 i0 100 0.0769230769230769 28 0 8 0 129 156 141713 141740 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5
27372685 27372685 PRJNA924320_S_NODE_23383_length_218_cov_2.301775_g23241_i0 PRJNA924320 23383 218 2.301775 5.0178695 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 70.1 6.22e-12   NR WP_295723641.1 253161 g23241 i0 50.7 0.922018348623853 67 33 92.2 0 16 216 1319 1385 WP_295723641.1 ATP-binding cassette domain-containing protein [uncultured Methanobrevibacter sp.] diamond 201 70.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
27474368 27474368 PRJNA924320_S_NODE_16463_length_250_cov_2.472637_g16321_i0 PRJNA924320 16463 250 2.472637 6.1815925 root 1 Root_unresolved Root_unresolved 48.5 3.71e-4   NR WP_292800363.1 66852 g16321 i0 45 1.92 40 22 48 0 248 129 954 993 WP_292800363.1 hypothetical protein [Methanobrevibacter sp.] diamond 480 48.9 0.991820040899796 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
28098512 28098512 PRJNA924320_S_NODE_34545_length_188_cov_1.834532_g34403_i0 PRJNA924320 34545 188 1.834532 3.44892016 Thermoplasmata archaeon 1906666 Archaea Archaea 42.4 0.0236   NR HKW42645.1 1906666 g34403 i0 40 0.877659574468085 55 30 83 1 157 2 155 209 HKW42645.1 hypothetical protein [Thermoplasmata archaeon] diamond 165 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28761525 28761525 PRJNA924320_S_NODE_22267_length_222_cov_4.994220_g22125_i0 PRJNA924320 22267 222 4.99422 11.0871684 Thermoplasmata archaeon 1906666 Archaea Archaea 42.4 0.0374   NR RLF60962.1 1906666 g22125 i0 38.1 0.567567567567568 42 26 56.8 0 190 65 298 339 RLF60962.1 MAG: tryptophan--tRNA ligase [Thermoplasmata archaeon] diamond 126 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28768792 28768792 PRJNA924320_S_NODE_55327_length_162_cov_0.902655_g55185_i0 PRJNA924320 55327 162 0.902655 1.4623011 root 1 Root_unresolved Root_unresolved 50.1 3.15e-5   NR WP_013875895.1 387343 g55185 i0 57.1 2.2962962962963 35 15 64.8 0 107 3 183 217 WP_013875895.1 Tm-1-like ATP-binding domain-containing protein [Halopiger xanaduensis] diamond 372 50.4 0.994047619047619 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halopiger Halopiger xanaduensis
29053192 29053192 PRJNA924320_S_NODE_9068_length_324_cov_1.567273_g8926_i0 PRJNA924320 9068 324 1.567273 5.07796452 Methanobrevibacter 2172 Archaea Archaea 56.6 8.73e-7   NR WP_042703738.1 39441 g8926 i0 38.5 2.74074074074074 96 53 84.3 2 273 1 105 199 WP_042703738.1 MIP/aquaporin family protein [Methanobrevibacter arboriphilus] diamond 888 56.6 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
29620920 29620920 PRJNA924320_S_NODE_33690_length_190_cov_1.446809_g33548_i0 PRJNA924320 33690 190 1.446809 2.7489371 Thermoplasma 2302 Archaea Archaea 79 3.15e-15   NR WP_010917312.1 50339 g33548 i0 61.9 3.97894736842105 63 24 99.5 0 1 189 384 446 WP_010917312.1 aldehyde dehydrogenase family protein [Thermoplasma volcanium] diamond 756 79 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Thermoplasmataceae Thermoplasma Thermoplasma volcanium
30348434 30348434 PRJNA924320_S_NODE_16812_length_248_cov_2.165829_g16670_i0 PRJNA924320 16812 248 2.165829 5.37125592 Archaea 2157 Archaea Archaea 60.1 1.93e-8   NR WP_048082581.1 2160 g16670 i0 42.2 7.125 64 37 77.4 0 46 237 54 117 WP_048082581.1 MULTISPECIES: MIP/aquaporin family protein [Methanobacterium] diamond 1767 60.5 0.993388429752066 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium  
30435739 30435739 PRJNA924320_S_NODE_45073_length_168_cov_1.596639_g44931_i0 PRJNA924320 45073 168 1.596639 2.68235352 Thermoplasmata archaeon 1906666 Archaea Archaea 64.3 2.65e-10   NR MCK4971085.1 1906666 g44931 i0 67.4 7.60714285714286 46 15 82.1 0 138 1 157 202 MCK4971085.1 DNA-directed RNA polymerase subunit A'' [Thermoplasmata archaeon] diamond 1278 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30941161 30941161 PRJNA924320_S_NODE_134_length_1922_cov_5.797117_g128_i0 PRJNA924320 134 1922 5.797117 111.42058874 Methanoregulaceae archaeon 2485498 Archaea Archaea 69.7 2.98e-8   NR HNJ81026.1 2485498 g128 i0 53.3 0.0936524453694069 60 26 9.4 1 1153 1332 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 69.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31320163 31320163 PRJNA924320_S_NODE_27815_length_205_cov_0.980769_g27673_i0 PRJNA924320 27815 205 0.980769 2.01057645 Methanobacteriota archaeon 2026739 Archaea Archaea 43.1 0.00293   NR GIT75022.1 2026739 g27673 i0 33.3 0.746341463414634 51 33 74.6 1 163 11 24 73 GIT75022.1 MAG: hypothetical protein Ct9H300mP30_0840 [Methanobacteriota archaeon] diamond 153 43.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
31517412 31517412 PRJNA924320_S_NODE_50616_length_165_cov_0.879310_g50474_i0 PRJNA924320 50616 165 0.87931 1.4508615 root 1 Root_unresolved Root_unresolved 41.6 0.0335   NR UCE39290.1 1906666 g50474 i0 39.6 1.94545454545455 53 31 96.4 1 3 161 1269 1320 UCE39290.1 MAG: metallophosphoesterase [Thermoplasmata archaeon] diamond 321 41.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31763004 31763004 PRJNA924320_S_NODE_1197_length_817_cov_3.263021_g1107_i0 PRJNA924320 1197 817 3.263021 26.65888157 Thermoplasmata archaeon 1906666 Archaea Archaea 53.9 7.83e-5   NR HEV8595550.1 1906666 g1107 i0 35.3 0.859241126070991 116 60 37.1 3 472 774 17 132 HEV8595550.1 single-stranded DNA-binding protein [Thermoplasmata archaeon] diamond 702 53.9 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31952801 31952801 PRJNA924320_S_NODE_54097_length_163_cov_0.894737_g53955_i0 PRJNA924320 54097 163 0.894737 1.45842131 Halalkalicoccus sp. NIPERK 1973143 Archaea Archaea 92.4 1.34e-20   NR WP_286045471.1 3053469 g53955 i0 88.2 4.78527607361963 51 6 93.9 0 161 9 294 344 WP_286045471.1 AIR synthase family protein [Halalkalicoccus sp. NIPERK01] diamond 780 92.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus sp. NIPERK01
32679824 32679824 PRJNA924320_S_NODE_8300_length_337_cov_1.388889_g8158_i0 PRJNA924320 8300 337 1.388889 4.68055593 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 43.1 0.0235   NR HIL65910.1 2163009 g8158 i0 30.2 0.560830860534125 63 44 56.1 0 246 58 54 116 HIL65910.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 189 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
32679825 32679825 PRJNA924320_S_NODE_8500_length_333_cov_2.052817_g8358_i0 PRJNA924320 8500 333 2.052817 6.83588061 Methanobacteriota archaeon 2026739 Archaea Archaea 70.5 4.96e-12   NR RMG30150.1 2026739 g8358 i0 41 4.82882882882883 78 45 70.3 1 318 85 148 224 RMG30150.1 MAG: aquaporin [Methanobacteriota archaeon] diamond 1608 70.5 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
32743171 32743171 PRJNA924320_S_NODE_34340_length_189_cov_1.092857_g34198_i0 PRJNA924320 34340 189 1.092857 2.06549973 Methanothrix sp. 90426 Archaea Archaea 68.9 9.6e-12   NR MCX6675397.1 90426 g34198 i0 52.5 2.87301587301587 59 28 93.7 0 7 183 171 229 MCX6675397.1 translation elongation factor EF-1 subunit alpha [Methanothrix sp.] diamond 543 68.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;