RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26834941 26834941 PRJNA924320_S_NODE_40121_length_177_cov_1.195312_g39979_i0 PRJNA924320 40121 177 1.195312 2.11570224 Armatimonadota bacterium 2033014 Bacteria Bacteria 72.4 5.22e-13   NR MCE9558582.1 2033014 g39979 i0 50.9 0.966101694915254 57 28 96.6 0 175 5 602 658 MCE9558582.1 glycosyltransferase family 4 protein [Armatimonadota bacterium] diamond 171 72.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30024881 30024881 PRJNA924320_S_NODE_33611_length_190_cov_1.744681_g33469_i0 PRJNA924320 33611 190 1.744681 3.3148939 Armatimonadota bacterium 2033014 Bacteria Bacteria 41.6 0.0482   NR MBI1334963.1 2033014 g33469 i0 45.2 0.663157894736842 42 23 66.3 0 129 4 51 92 MBI1334963.1 hypothetical protein [Armatimonadota bacterium] diamond 126 41.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;