RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320" and tax_clade = "Pithoviruses"

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tax_superkingdom 1

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27372693 27372693 PRJNA924320_S_NODE_32443_length_193_cov_1.062500_g32301_i0 PRJNA924320 32443 193 1.0625 2.050625 Pithovirus LCDPAC 2506600 Viruses Viruses 43.9 0.00621   NR QBK84707.1 2506600 g32301 i0 36.4 1.0259067357513 66 38 99.5 2 2 193 22 85 QBK84707.1 MAG: hypothetical protein LCDPAC01_01880 [Pithovirus LCDPAC01] diamond 198 43.9 1 Viruses Pithoviruses             Pithovirus LCDPAC01
29172244 29172244 PRJNA924320_S_NODE_17069_length_247_cov_1.227273_g16927_i0 PRJNA924320 17069 247 1.227273 3.03136431 Pithovirus LCPAC1 2506586 Viruses Viruses 66.2 1.92e-10   NR QBK89990.1 2506586 g16927 i0 49.2 0.716599190283401 59 30 71.7 0 70 246 137 195 QBK89990.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 177 66.2 1 Viruses Pithoviruses             Pithovirus LCPAC101

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;