RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28351128 28351128 PRJNA924320_S_NODE_49346_length_165_cov_1.318966_g49204_i0 PRJNA924320 49346 165 1.318966 2.1762939 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.3 0.0029   NR MCQ9208137.1 2035772 g49204 i0 51.3 0.709090909090909 39 14 70.9 1 11 127 150 183 MCQ9208137.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 117 44.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32237961 32237961 PRJNA924320_S_NODE_4298_length_454_cov_3.190123_g4157_i0 PRJNA924320 4298 454 3.190123 14.48315842 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.0153   NR MFH1478934.1 2035772 g4157 i0 39.3 0.403083700440529 61 35 39.6 2 212 391 42 101 MFH1478934.1 6-carboxytetrahydropterin synthase [Candidatus Omnitrophota bacterium] diamond 183 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;