RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA924320", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 16 ✖

tax_clade 1

  • Metamonada · 16 ✖

bioproject 1

  • PRJNA924320 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8552008 8552008 PRJNA924320_S_NODE_1567_length_722_cov_137.717682_g1458_i0 PRJNA924320 1567 722 137.717682 994.32166404 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 91.6 1.53e-13   NTclustered gi|1270119057|gb|MG264531.1| 2049346 g1458 i0 88.462 12.2520775623269 78 5 11 4 3 79 220 146 Blattamonas nauphoetae strain Z61EP small subunit ribosomal RNA gene, partial sequence blastn 8846 91.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
26651787 26651787 PRJNA924320_S_NODE_46241_length_167_cov_0.864407_g46099_i0 PRJNA924320 46241 167 0.864407 1.44355969 Oxymonadida 66288 Preaxostyla other_Eukaryota 69.3 5.59e-12   NR KAA6388301.1 222440 g46099 i0 61.1 3.01796407185629 54 21 97 0 5 166 100 153 KAA6388301.1 MAG: putative 116 kDa U5 small nuclear ribonucleoprotein component, partial [Streblomastix strix] diamond 504 69.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
27309348 27309348 PRJNA924320_S_NODE_19863_length_232_cov_1.672131_g19721_i0 PRJNA924320 19863 232 1.672131 3.87934392 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 64.3 8.11e-10   NR KAJ4454936.1 342808 g19721 i0 62.3 1.99137931034483 77 28 98.3 1 228 1 193 269 KAJ4454936.1 putative Heat shock cognate protein 80 [Paratrimastix pyriformis] diamond 462 64.3 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27751465 27751465 PRJNA924320_S_NODE_17484_length_244_cov_2.092308_g17342_i0 PRJNA924320 17484 244 2.092308 5.10523152 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 59.3 4.83e-8   NR KAJ4459671.1 342808 g17342 i0 43.2 1.86885245901639 74 39 91 1 23 244 9 79 KAJ4459671.1 putative Cysteine proteinase 3 [Paratrimastix pyriformis] diamond 456 59.3 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28351092 28351092 PRJNA924320_S_NODE_10346_length_305_cov_2.312500_g10204_i0 PRJNA924320 10346 305 2.3125 7.053125 Streblomastix strix 222440 Preaxostyla other_Eukaryota 122 1.13e-29   NR KAA6384128.1 222440 g10204 i0 52.6 0.954098360655738 97 46 95.4 0 7 297 161 257 KAA6384128.1 MAG: putative G2-specific protein kinase fin1, partial [Streblomastix strix] diamond 291 122 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
29298415 29298415 PRJNA924320_S_NODE_16409_length_251_cov_1.009901_g16267_i0 PRJNA924320 16409 251 1.009901 2.53485151 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 104 5.3e-24   NR WCZ58395.1 1709329 g16267 i0 62.8 2.8804780876494 78 29 93.2 0 4 237 197 274 WCZ58395.1 protein transport protein Sec61 subunit alpha [Paratrimastix eleionoma] diamond 723 104 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
29715815 29715815 PRJNA924320_S_NODE_7090_length_360_cov_8.405145_g6948_i0 PRJNA924320 7090 360 8.405145 30.258522 root 1 Root_unresolved Root_unresolved 109 2.05e-28   NR KAA6379614.1 222440 g6948 i0 57.8 2.23333333333333 90 38 75 0 2 271 4 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 804 109 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
30656579 30656579 PRJNA924320_S_NODE_47633_length_166_cov_1.307692_g47491_i0 PRJNA924320 47633 166 1.307692 2.17076872 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 61.2 3.96e-9   NR KAJ4454937.1 342808 g47491 i0 55.1 0.885542168674699 49 22 88.6 0 20 166 712 760 KAJ4454937.1 putative General transcription and DNA repair factor IIH helicase subunit XPB [Paratrimastix pyriformis] diamond 147 61.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30783000 30783000 PRJNA924320_S_NODE_51174_length_164_cov_1.330435_g51032_i0 PRJNA924320 51174 164 1.330435 2.1819134 Streblomastix strix 222440 Preaxostyla other_Eukaryota 51.6 9.37e-6   NR KAA6393414.1 222440 g51032 i0 51.2 2.48780487804878 43 21 78.7 0 8 136 311 353 KAA6393414.1 MAG: putative NEK protein kinase [Streblomastix strix] diamond 408 51.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31383634 31383634 PRJNA924320_S_NODE_42816_length_172_cov_1.243902_g42674_i0 PRJNA924320 42816 172 1.243902 2.13951144 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 47 4.63e-4   NR KAK2949729.1 2049346 g42674 i0 44.8 4.86627906976744 58 29 97.7 3 171 4 36 92 KAK2949729.1 putative MORN repeat protein [Blattamonas nauphoetae] diamond 837 47 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
31604977 31604977 PRJNA924320_S_NODE_24256_length_215_cov_2.457831_g24114_i0 PRJNA924320 24256 215 2.457831 5.28433665 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 57 2.45e-7   NR KAK2964737.1 2049346 g24114 i0 37.5 0.893023255813953 64 40 89.3 0 200 9 218 281 KAK2964737.1 putative Radial spoke head 10 [Blattamonas nauphoetae] diamond 192 57 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae
31605012 31605012 PRJNA924320_S_NODE_58476_length_157_cov_3.175926_g58334_i0 PRJNA924320 58476 157 3.175926 4.98620382 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 48.9 7.76e-5   NR KAJ4459843.1 342808 g58334 i0 45.1 0.974522292993631 51 27 97.5 1 153 1 33 82 KAJ4459843.1 putative Intraflagellar transport protein 88 [Paratrimastix pyriformis] diamond 153 48.9 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
32079403 32079403 PRJNA924320_S_NODE_6658_length_370_cov_25.180685_g6516_i0 PRJNA924320 6658 370 25.180685 93.1685345 Streblomastix strix 222440 Preaxostyla other_Eukaryota 114 3.44e-30   NR KAA6379614.1 222440 g6516 i0 58.1 2.96756756756757 93 39 75.4 0 368 90 1 93 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 1098 114 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
32332950 32332950 PRJNA924320_S_NODE_8319_length_336_cov_3.675958_g8177_i0 PRJNA924320 8319 336 3.675958 12.35121888 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 68.6 5.32e-11   NR XP_067719831.1 2049356 g8177 i0 37.8 1.74107142857143 82 50 72.3 1 90 332 55 136 XP_067719831.1 putative protein YIPF1/2 [Monocercomonoides exilis] diamond 585 68.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
32459255 32459255 PRJNA924320_S_NODE_16799_length_248_cov_2.381910_g16657_i0 PRJNA924320 16799 248 2.38191 5.9071368 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 106 1.7999999999999997e-24   NR KAJ4457126.1 342808 g16657 i0 65.8 3.64112903225806 73 25 88.3 0 230 12 1287 1359 KAJ4457126.1 putative Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 [Paratrimastix pyriformis] diamond 903 106 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
32774406 32774406 PRJNA924320_S_NODE_30860_length_196_cov_4.047619_g30718_i0 PRJNA924320 30860 196 4.047619 7.93333324 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 73.6 2.67e-13   NR XP_067731032.1 2049356 g30718 i0 50 2.96938775510204 62 28 90.3 1 6 182 281 342 XP_067731032.1 putative transcriptional repressor NF-X1 [Monocercomonoides exilis] diamond 582 73.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;