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contig_metadata

11 rows where bioproject = "PRJNA924320", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 11 ✖

tax_clade 1

  • Metamonada · 11 ✖

bioproject 1

  • PRJNA924320 · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7277163 7277163 PRJNA924320_S_NODE_12846_length_277_cov_4.214912_g12704_i0 PRJNA924320 12846 277 4.214912 11.67530624 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 62.1 4.23e-5   NTclustered gi|2794902854|ref|XM_067913699.1| 135588 g12704 i0 100 11.7184115523466 33 0 12 0 4 36 3120 3152 Histomonas meleagridis uncharacterized protein (GO595_010963), partial mRNA blastn 3246 62.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
17477497 17477497 PRJNA924320_S_NODE_47974_length_166_cov_0.871795_g47832_i0 PRJNA924320 47974 166 0.871795 1.4471797 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.8 0.014   NTclustered gi|2806468871|ref|XM_068507352.1| 1144522 g47832 i0 100 0.168674698795181 28 0 17 0 125 152 1129 1156 Tritrichomonas foetus uncharacterized protein (TRFO_30427), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
26613007 26613007 PRJNA924320_S_NODE_50461_length_165_cov_0.879310_g50319_i0 PRJNA924320 50461 165 0.87931 1.4508615 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 57.8 6.29e-8   NR XP_001318799.1 412133 g50319 i0 65.1 2.72727272727273 43 15 78.2 0 143 15 498 540 XP_001318799.1 copine family [Trichomonas vaginalis G3] diamond 450 57.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
26739381 26739381 PRJNA924320_S_NODE_52481_length_164_cov_0.878261_g52339_i0 PRJNA924320 52481 164 0.878261 1.44034804 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 41.2 0.0447   NR XP_068365616.1 1144522 g52339 i0 35 1.09756097560976 60 32 97 1 161 3 185 244 XP_068365616.1 Ser/Thr protein phosphatase [Tritrichomonas foetus] diamond 180 41.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28572172 28572172 PRJNA924320_S_NODE_7847_length_345_cov_1.550676_g7705_i0 PRJNA924320 7847 345 1.550676 5.3498322 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 51.6 9.53e-5   NR XP_067775923.1 135588 g7705 i0 35 0.695652173913043 80 51 69.6 1 13 252 189 267 XP_067775923.1 myosin heavy chain, embryonic smooth muscle isoform [Histomonas meleagridis] diamond 240 51.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30024892 30024892 PRJNA924320_S_NODE_52631_length_163_cov_2.587719_g52489_i0 PRJNA924320 52631 163 2.587719 4.21798197 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 53.9 6.92e-7   NR XP_068352053.1 1144522 g52489 i0 43.4 0.975460122699387 53 30 97.5 0 5 163 49 101 XP_068352053.1 NLI interacting factor-like phosphatase family protein [Tritrichomonas foetus] diamond 159 53.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30285099 30285099 PRJNA924320_S_NODE_13772_length_269_cov_2.645455_g13630_i0 PRJNA924320 13772 269 2.645455 7.11627395 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.6 0.00201   NR XP_001325889.1 412133 g13630 i0 71.9 4.84014869888476 32 5 35.7 1 40 135 193 220 XP_001325889.1 ribosomal large subunit biogenesis [Trichomonas vaginalis G3] diamond 1302 46.6 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31573484 31573484 PRJNA924320_S_NODE_45976_length_167_cov_1.186441_g45834_i0 PRJNA924320 45976 167 1.186441 1.98135647 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 73.9 8.56e-14   NR XP_001307871.1 412133 g45834 i0 56.6 0.952095808383233 53 23 95.2 0 2 160 151 203 XP_001307871.1 arginine omega-N asymmetric methyltransferase protein [Trichomonas vaginalis G3] diamond 159 73.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31731286 31731286 PRJNA924320_S_NODE_3517_length_498_cov_1.416481_g3377_i0 PRJNA924320 3517 498 1.416481 7.05407538 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 73.6 1.04e-11   NR XP_068348222.1 1144522 g3377 i0 36.7 0.771084337349398 128 72 75.3 8 377 3 355 476 XP_068348222.1 uncharacterized protein TRFO_38731 [Tritrichomonas foetus] diamond 384 73.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31731291 31731291 PRJNA924320_S_NODE_43377_length_171_cov_1.254098_g43235_i0 PRJNA924320 43377 171 1.254098 2.14450758 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 81.3 3.82e-16   NR XP_068362600.1 1144522 g43235 i0 64 4.68421052631579 50 18 87.7 0 153 4 163 212 XP_068362600.1 AGC family protein kinase [Tritrichomonas foetus] diamond 801 81.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31921214 31921214 PRJNA924320_S_NODE_16337_length_251_cov_1.747525_g16195_i0 PRJNA924320 16337 251 1.747525 4.38628775 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 65.9 2.17e-10   NR XP_067779653.1 135588 g16195 i0 46.9 0.764940239043825 64 34 76.5 0 250 59 238 301 XP_067779653.1 CMGC family protein kinase [Histomonas meleagridis] diamond 192 65.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;