RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28193101 28193101 PRJNA924320_S_NODE_27606_length_205_cov_1.634615_g27464_i0 PRJNA924320 27606 205 1.634615 3.35096075 Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2 2013734 Bacteria Bacteria 80.5 9.78e-17   NR PKN73970.1 2013734 g27464 i0 50.7 0.980487804878049 67 33 98 0 201 1 32 98 PKN73970.1 MAG: NAD(P)H:quinone oxidoreductase [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2] diamond 201 80.5 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-2
30782959 30782959 PRJNA924320_S_NODE_11434_length_292_cov_1.720165_g11292_i0 PRJNA924320 11434 292 1.720165 5.0228818 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 73.6 7.74e-13   NR MDD3051058.1 2030808 g11292 i0 39.4 1.77739726027397 94 55 94.5 1 278 3 82 175 MDD3051058.1 pyridoxal phosphate-dependent aminotransferase [Candidatus Cloacimonadota bacterium] diamond 519 73.6 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;