RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA924320", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA924320 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28667065 28667065 PRJNA924320_S_NODE_40547_length_176_cov_1.559055_g40405_i0 PRJNA924320 40547 176 1.559055 2.7439368 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 69.3 7.27e-13   NR MBX9724270.1 2364082 g40405 i0 88.9 0.613636363636364 36 4 61.4 0 2 109 135 170 MBX9724270.1 50S ribosomal protein L15e [Candidatus Obscuribacterales bacterium] diamond 108 69.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31478582 31478582 PRJNA924320_S_NODE_28756_length_202_cov_1.333333_g28614_i0 PRJNA924320 28756 202 1.333333 2.69333266 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 61.6 4.58e-9   NR MDZ4832835.1 2052166 g28614 i0 51.4 1.06930693069307 72 25 98 4 200 3 423 490 MDZ4832835.1 glutamine--tRNA ligase/YqeY domain fusion protein [Candidatus Melainabacteria bacterium] diamond 216 61.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
32900326 32900326 PRJNA924320_S_NODE_30440_length_198_cov_0.859060_g30298_i0 PRJNA924320 30440 198 0.85906 1.7009388 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 48.5 1.75e-4   NR HEY9873064.1 2364082 g30298 i0 35 2.66666666666667 60 39 90.9 0 196 17 217 276 HEY9873064.1 cache domain-containing protein [Candidatus Obscuribacterales bacterium] diamond 528 48.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;