RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA924320", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA924320 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27340939 27340939 PRJNA924320_S_NODE_4943_length_425_cov_2.082447_g4801_i0 PRJNA924320 4943 425 2.082447 8.85039975 Minisyncoccota bacterium 2053589 Bacteria Bacteria 142 7.93e-41   NR MDR3549538.1 2053589 g4801 i0 66.3 0.691764705882353 98 33 69.2 0 397 104 8 105 MDR3549538.1 small nuclear ribonucleoprotein Sm D2 [Candidatus Paceibacterota bacterium] diamond 294 142 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27877585 27877585 PRJNA924320_S_NODE_43785_length_170_cov_2.107438_g43643_i0 PRJNA924320 43785 170 2.107438 3.5826446 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.4 0.00155   NR MDR3582248.1 2053589 g43643 i0 46.4 0.988235294117647 56 30 98.8 0 168 1 249 304 MDR3582248.1 clusterin-associated protein 1 [Candidatus Paceibacterota bacterium] diamond 168 45.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30182645 30182645 PRJNA924320_S_NODE_52232_length_164_cov_0.886957_g52090_i0 PRJNA924320 52232 164 0.886957 1.45460948 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.5 2.89e-10   NR MDR3572201.1 2053589 g52090 i0 77.8 0.658536585365854 36 8 65.9 0 4 111 53 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 108 60.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31036069 31036069 PRJNA924320_S_NODE_26255_length_209_cov_1.725000_g26113_i0 PRJNA924320 26255 209 1.725 3.60525 Minisyncoccota bacterium 2053589 Bacteria Bacteria 57 2.18e-7   NR MDR3582248.1 2053589 g26113 i0 46.4 1.98086124401914 69 36 97.6 1 209 6 183 251 MDR3582248.1 clusterin-associated protein 1 [Candidatus Paceibacterota bacterium] diamond 414 57 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;