RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rifleibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rifleibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27561570 27561570 PRJNA924320_S_NODE_19644_length_233_cov_1.820652_g19502_i0 PRJNA924320 19644 233 1.820652 4.24211916 Candidatus Riflebacteria bacterium HGW-Riflebacteria-2 2013830 Bacteria Bacteria 68.6 2.68e-11   NR PKL46250.1 2013830 g19502 i0 38.9 0.927038626609442 72 44 92.7 0 232 17 430 501 PKL46250.1 MAG: hypothetical protein CVV42_17115 [Candidatus Riflebacteria bacterium HGW-Riflebacteria-2] diamond 216 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Riflebacteria bacterium HGW-Riflebacteria-2
32900332 32900332 PRJNA924320_S_NODE_36440_length_184_cov_1.859259_g36298_i0 PRJNA924320 36440 184 1.859259 3.42103656 Candidatus Riflebacteria bacterium HGW-Riflebacteria-2 2013830 Bacteria Bacteria 70.5 2.69e-12   NR PKL46101.1 2013830 g36298 i0 55.8 2.59239130434783 52 23 84.8 0 176 21 474 525 PKL46101.1 MAG: phosphoenolpyruvate carboxykinase (ATP) [Candidatus Riflebacteria bacterium HGW-Riflebacteria-2] diamond 477 70.5 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Riflebacteria bacterium HGW-Riflebacteria-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;