RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA924320", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16202274 16202274 PRJNA924320_S_NODE_45513_length_167_cov_3.957627_g45371_i0 PRJNA924320 45513 167 3.957627 6.60923709 Pseudomonadati 3379134 Bacteria Bacteria 81.6 2.57e-16   NR MBN2245626.1 2052149 g45371 i0 73.6 2.8562874251497 53 14 95.2 0 2 160 240 292 MBN2245626.1 molecular chaperone DnaK [Candidatus Aminicenantes bacterium] diamond 477 82.4 0.990291262135922 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
28951334 28951334 PRJNA924320_S_NODE_7628_length_349_cov_2.133333_g7486_i0 PRJNA924320 7628 349 2.133333 7.44533217 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 42 0.0232   NR MBM3295425.1 2052149 g7486 i0 43.8 0.412607449856734 48 26 41.3 1 169 26 15 61 MBM3295425.1 formamidopyrimidine-DNA glycosylase [Candidatus Aminicenantes bacterium] diamond 144 42 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;