RNAquarium Metadata Server
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contig_metadata

11 rows where bioproject = "PRJNA924320", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 11 ✖

tax_clade 1

  • Apusozoa · 11 ✖

bioproject 1

  • PRJNA924320 · 11 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2174567 2174567 PRJNA924320_S_NODE_39742_length_178_cov_1.023256_g39600_i0 PRJNA924320 39742 178 1.023256 1.82139568 Thecamonas trahens 529818 Root_unresolved Root_unresolved 171 3.98e-38   NTclustered gi|923125065|ref|XM_013900547.1| 461836 g39600 i0 84.181 26.5280898876404 177 26 99 2 3 178 340 165 Thecamonas trahens ATCC 50062 60S ribosomal protein L3 (AMSG_07514), mRNA blastn 4722 171 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
7630273 7630273 PRJNA924320_S_NODE_29926_length_199_cov_1.020000_g29784_i0 PRJNA924320 29926 199 1.02 2.0298 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 70.1 4.69e-12   NR XP_013759092.1 461836 g29784 i0 43.9 2.98492462311558 66 30 99.5 1 199 2 50 108 XP_013759092.1 succinyl-diaminopimelate desuccinylase [Thecamonas trahens ATCC 50062] diamond 594 70.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30814531 30814531 PRJNA924320_S_NODE_10394_length_305_cov_1.343750_g10252_i0 PRJNA924320 10394 305 1.34375 4.0984375 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 118 5.46e-29   NR XP_013757530.1 461836 g10252 i0 55.7 2.88196721311475 97 43 95.4 0 15 305 134 230 XP_013757530.1 AGC protein kinase [Thecamonas trahens ATCC 50062] diamond 879 118 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30814535 30814535 PRJNA924320_S_NODE_12954_length_276_cov_2.418502_g12812_i0 PRJNA924320 12954 276 2.418502 6.67506552 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.3 2.8e-4   NR XP_013755018.1 461836 g12812 i0 26.6 0.858695652173913 79 56 85.9 1 29 265 1587 1663 XP_013755018.1 uncharacterized protein AMSG_12232 [Thecamonas trahens ATCC 50062] diamond 237 49.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31604980 31604980 PRJNA924320_S_NODE_2576_length_576_cov_1.855787_g2443_i0 PRJNA924320 2576 576 1.855787 10.68933312 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 164 1.19e-44   NR XP_013759428.1 461836 g2443 i0 44.9 0.916666666666667 176 94 90.6 2 523 2 14 188 XP_013759428.1 succinyl-diaminopimelate desuccinylase [Thecamonas trahens ATCC 50062] diamond 528 164 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31952780 31952780 PRJNA924320_S_NODE_31797_length_194_cov_1.758621_g31655_i0 PRJNA924320 31797 194 1.758621 3.41172474 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 65.9 1.37e-10   NR XP_013754247.1 461836 g31655 i0 37.5 0.989690721649485 64 40 99 0 3 194 496 559 XP_013754247.1 coatomer protein complex [Thecamonas trahens ATCC 50062] diamond 192 65.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32016098 32016098 PRJNA924320_S_NODE_1238_length_804_cov_18.796026_g1141_i0 PRJNA924320 1238 804 18.796026 151.12004904 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87.4 1.7e-15   NR XP_013758183.1 461836 g1141 i0 31.4 0.843283582089552 226 129 83.6 4 721 50 150 351 XP_013758183.1 cystatin-A2 [Thecamonas trahens ATCC 50062] diamond 678 87.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32086685 32086685 PRJNA924320_S_NODE_35438_length_186_cov_2.226277_g35296_i0 PRJNA924320 35438 186 2.226277 4.14087522 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 41.2 0.0351   NR XP_013758370.1 461836 g35296 i0 43.1 2.01612903225806 51 25 82.3 1 182 30 95 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 375 41.6 0.990384615384615 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32269455 32269455 PRJNA924320_S_NODE_1498_length_736_cov_3.323144_g1389_i0 PRJNA924320 1498 736 3.323144 24.45833984 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 193 8.69e-58   NR XP_013762487.1 461836 g1389 i0 45.1 4.69565217391304 237 115 96.2 5 11 718 9 231 XP_013762487.1 countin-1 [Thecamonas trahens ATCC 50062] diamond 3456 193 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32395938 32395938 PRJNA924320_S_NODE_37199_length_183_cov_1.037313_g37057_i0 PRJNA924320 37199 183 1.037313 1.89828279 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 69.3 6.78e-12   NR XP_013757797.1 461836 g37057 i0 53.4 1.88524590163934 58 26 95.1 1 8 181 152 208 XP_013757797.1 beta-lactamase [Thecamonas trahens ATCC 50062] diamond 345 69.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32711486 32711486 PRJNA924320_S_NODE_44260_length_170_cov_0.867769_g44118_i0 PRJNA924320 44260 170 0.867769 1.4752073 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 73.9 1.33e-13   NR XP_013757797.1 461836 g44118 i0 60 2.84117647058824 55 21 97.1 1 169 5 133 186 XP_013757797.1 beta-lactamase [Thecamonas trahens ATCC 50062] diamond 483 73.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;