RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA922890" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 7 ✖

bioproject 1

  • PRJNA922890 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5080226 5080226 PRJNA922890_P_NODE_28104_length_360_cov_0.982818_g27694_i0 PRJNA922890 28104 360 0.982818 3.5381448 Deinococcus 1298 Bacteria Bacteria 385 2.96e-102   NTclustered gi|485099143|ref|NR_102538.1| 432329 g27694 i0 87.135 106.905555555556 342 41 95 3 3 343 1224 1563 Deinococcus peraridilitoris strain KR-200 23S ribosomal RNA gene, complete sequence blastn 38486 385 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus peraridilitoris
6001837 6001837 PRJNA922890_P_NODE_78245_length_231_cov_0.888889_g77835_i0 PRJNA922890 78245 231 0.888889 2.05333359 Deinococcus sp. NW-56 2080419 Bacteria Bacteria 377 3e-100   NTclustered gi|1339790003|gb|CP026516.1| 2080419 g77835 i0 96.104 344.580086580087 231 9 100 0 1 231 2417682 2417452 Deinococcus sp. NW-56 chromosome, complete genome blastn 79598 377 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus sp. NW-56
12731322 12731322 PRJNA922890_P_NODE_18730_length_441_cov_1.604839_g18320_i0 PRJNA922890 18730 441 1.604839 7.07733999 Deinococcus 1298 Bacteria Bacteria 660 0   NTclustered gi|1028459476|gb|CP011387.1| 1182568 g18320 i0 94.614 361.573696145125 427 21 96 1 1 425 72045 71619 Deinococcus puniceus strain DY1, complete genome blastn 159454 665 0.992481203007519 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus puniceus
20378156 20378156 PRJNA922890_P_NODE_10776_length_585_cov_1.315891_g10373_i0 PRJNA922890 10776 585 1.315891 7.69796235 Deinococcus 1298 Bacteria Bacteria 760 0   NTclustered gi|730601855|gb|CP010028.1| 57497 g10373 i0 90.119 182.468376068376 587 54 100 4 1 585 70595 70011 Deinococcus swuensis strain DY59, complete genome blastn 106744 760 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiopugnans
21300686 21300686 PRJNA922890_P_NODE_78437_length_230_cov_1.683230_g78027_i0 PRJNA922890 78437 230 1.68323 3.871429 Deinococcus gobiensis 502394 Bacteria Bacteria 375 1.07e-99   NTclustered gi|379998737|gb|CP002191.1| 745776 g78027 i0 96.087 215.295652173913 230 9 100 0 1 230 111782 112011 Deinococcus gobiensis I-0, complete genome blastn 49518 375 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus gobiensis
22574526 22574526 PRJNA922890_P_NODE_1338_length_1535_cov_2.828104_g1190_i0 PRJNA922890 1338 1535 2.828104 43.4113964 Trueperaceae bacterium 2026798 Bacteria Bacteria 1986 0   NTclustered gi|2621706202|emb|OY764543.1| 2026798 g1190 i0 90.176 314.37003257329 1537 133 99 14 3 1525 2559155 2560687 MAG: Trueperaceae bacterium isolate 617606ba-ac04-44ed-b980-3de5d93b502e genome assembly, chromosome: 1 blastn 482558 1986 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
24203412 24203412 PRJNA922890_P_NODE_15079_length_492_cov_3.078014_g14671_i0 PRJNA922890 15079 492 3.078014 15.14382888 Truepera 332248 Bacteria Bacteria 619 1.05e-172   NTclustered gi|470486385|ref|NR_076754.1| 332249 g14671 i0 89.431 308.75406504065 492 50 99 2 2 492 504 14 Truepera radiovictrix strain RQ-24 23S ribosomal RNA gene, complete sequence blastn 151907 619 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;