RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA922890", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 7 ✖

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA922890 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3803896 3803896 PRJNA922890_P_NODE_18423_length_445_cov_1.335106_g18013_i0 PRJNA922890 18423 445 1.335106 5.9412217 Paramyxoviridae 11158 Viruses Viruses 822 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g18013 i0 100 69.7977528089888 445 0 100 0 1 445 8124 8568 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 31060 822 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
7630027 7630027 PRJNA922890_P_NODE_426_length_2202_cov_3.424285_g365_i0 PRJNA922890 426 2202 3.424285 75.4027557 Orthorubulavirus 2560195 Viruses Viruses 4056 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g365 i0 99.909 67.4940962761126 2202 2 100 0 1 2202 15134 12933 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 148622 4061 0.998768776163507 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
12731434 12731434 PRJNA922890_P_NODE_6150_length_779_cov_1.540845_g5770_i0 PRJNA922890 6150 779 1.540845 12.00318255 Orthorubulavirus 2560195 Viruses Viruses 1439 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g5770 i0 100 68.2785622593068 779 0 100 0 1 779 11930 12708 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 53189 1439 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
13652317 13652317 PRJNA922890_P_NODE_74731_length_232_cov_1.128834_g74321_i0 PRJNA922890 74731 232 1.128834 2.61889488 Tiger orthorubulavirus 3028512 Viruses Viruses 385 1.7999999999999996e-102   NTclustered gi|2465104481|gb|OQ236149.1| 3028512 g74321 i0 96.943 81.8879310344828 229 7 99 0 1 229 2132 2360 MAG: Tiger orthorubulavirus isolate PMV/GD/ZAK2044/2021 genomic sequence blastn 18998 385 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Tiger orthorubulavirus
15279842 15279842 PRJNA922890_P_NODE_12_length_6501_cov_71.186723_g8_i0 PRJNA922890 12 6501 71.186723 4627.84886223 Orthorubulavirus 2560195 Viruses Viruses 11939 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g8 i0 99.815 74.3777880326104 6501 12 100 0 1 6501 6539 39 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 483530 11980 0.996577629382304 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
19103481 19103481 PRJNA922890_P_NODE_755_length_1840_cov_14.441558_g663_i0 PRJNA922890 755 1840 14.441558 265.7246672 Orthorubulavirus 2560195 Viruses Viruses 3387 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g663 i0 99.891 82.8451086956522 1840 2 100 0 1 1840 8340 6501 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 152435 3393 0.998231653404067 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
20378229 20378229 PRJNA922890_P_NODE_42676_length_297_cov_2.210526_g42266_i0 PRJNA922890 42676 297 2.210526 6.56526222 Paramyxoviridae 11158 Viruses Viruses 544 3.7299999999999996e-150   NTclustered gi|2721617856|gb|PP711545.1| 251774 g42266 i0 99.663 68.1212121212121 297 1 100 0 1 297 9410 9706 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 20232 549 0.990892531876138 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;