RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA922890", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 7 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 7 ✖

bioproject 1

  • PRJNA922890 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20025379 20025379 PRJNA922890_P_NODE_77556_length_231_cov_0.888889_g77146_i0 PRJNA922890 77556 231 0.888889 2.05333359 Lottia gigantea 225164 Mollusca Mollusca 56.5 0.002   NTclustered gi|676455154|ref|XM_009055665.1| 225164 g77146 i0 100 0.12987012987013 30 0 13 0 196 225 2594 2565 Lottia gigantea hypothetical protein mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
27972256 27972256 PRJNA922890_P_NODE_54925_length_264_cov_1.107692_g54515_i0 PRJNA922890 54925 264 1.107692 2.92430688 Reishia bronni 578817 Mollusca Mollusca 76.3 7.7e-14   NR QIQ54702.1 578817 g54515 i0 42.2 2.875 83 48 94.3 0 249 1 277 359 QIQ54702.1 capsule gland specific secretory protein [Reishia bronni] diamond 759 76.3 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neogastropoda Muricidae Reishia Reishia bronni
29368833 29368833 PRJNA922890_P_NODE_69709_length_235_cov_0.867470_g69299_i0 PRJNA922890 69709 235 0.86747 2.0385545 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.8 1.88e-9   NR XP_052077796.1 6549 g69299 i0 52.8 3.35744680851064 53 24 67.7 1 77 235 80 131 XP_052077796.1 eukaryotic translation initiation factor 3 subunit F-like [Mytilus californianus] diamond 789 63.2 0.993670886075949 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus californianus
29835073 29835073 PRJNA922890_P_NODE_61891_length_247_cov_2.949438_g61481_i0 PRJNA922890 61891 247 2.949438 7.28511186 Haliotis rubra 36100 Mollusca Mollusca 45.4 0.0042   NR XP_046576515.1 36100 g61481 i0 34.6 0.631578947368421 52 30 63.2 1 10 165 194 241 XP_046576515.1 uncharacterized skeletal organic matrix protein 2-like [Haliotis rubra] diamond 156 45.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
30126516 30126516 PRJNA922890_P_NODE_69472_length_235_cov_0.879518_g69062_i0 PRJNA922890 69472 235 0.879518 2.0668673 root 1 Root_unresolved Root_unresolved 45.1 0.00362   NR XP_050391094.1 6465 g69062 i0 34.9 2.4 63 38 80.4 1 224 36 97 156 XP_050391094.1 probable glutathione S-transferase 7 [Patella vulgata] diamond 564 45.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
32023433 32023433 PRJNA922890_P_NODE_33438_length_331_cov_2.736641_g33028_i0 PRJNA922890 33438 331 2.736641 9.05828171 Metazoa 33208 Mollusca Mollusca 160 8.049999999999999e-46   NR KAL5019371.1 13268 g33028 i0 67.3 11.6555891238671 110 35 99.7 1 1 330 3 111 KAL5019371.1 hypothetical protein ScPMuIL_005093 [Solemya velum] diamond 3858 161 0.993788819875776 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Solemyida Solemyidae Solemya Solemya velum
32047831 32047831 PRJNA922890_P_NODE_49338_length_277_cov_2.615385_g48928_i0 PRJNA922890 49338 277 2.615385 7.24461645 Ylistrum balloti 509963 Mollusca Mollusca 52 1.94e-5   NR XP_060081351.1 509963 g48928 i0 34.6 3.34657039711191 78 51 84.5 0 31 264 98 175 XP_060081351.1 glutathione S-transferase Mu 4-like [Ylistrum balloti] diamond 927 52 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Ylistrum Ylistrum balloti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;