RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA922890", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA922890 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9825533 9825533 PRJNA922890_P_NODE_27608_length_363_cov_0.823129_g27198_i0 PRJNA922890 27608 363 0.823129 2.98795827 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 379 1.39e-100   NTclustered gi|2782844603|ref|XM_067056021.1| 252671 g27198 i0 85.915 93.5674931129477 355 50 98 0 8 362 1398 1044 PREDICTED: Clytia hemisphaerica tubulin beta-4B chain (LOC136799316), mRNA blastn 33965 379 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
27600837 27600837 PRJNA922890_P_NODE_80444_length_229_cov_1.481250_g80034_i0 PRJNA922890 80444 229 1.48125 3.3920625 root 1 Root_unresolved Root_unresolved 94 2.88e-20   NR XP_065052198.1 499914 g80034 i0 67.6 2.89519650655022 71 23 93 0 11 223 473 543 XP_065052198.1 uncharacterized protein LOC135681586 [Rhopilema esculentum] diamond 663 94.4 0.995762711864407 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
28705855 28705855 PRJNA922890_P_NODE_84267_length_227_cov_3.417722_g83857_i0 PRJNA922890 84267 227 3.417722 7.75822894 root 1 Root_unresolved Root_unresolved 44.3 0.00868   NR PFX21664.1 50429 g83857 i0 42.2 1.08370044052863 45 26 59.5 0 75 209 230 274 PFX21664.1 hypothetical protein AWC38_SpisGene13848 [Stylophora pistillata] diamond 246 44.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
29495087 29495087 PRJNA922890_P_NODE_53730_length_266_cov_2.279188_g53320_i0 PRJNA922890 53730 266 2.279188 6.06264008 Metazoa 33208 Cnidaria other_Eukaryota 75.9 5.72e-14   NR XP_057309343.1 13093 g53320 i0 54.7 3.57518796992481 64 29 72.2 0 266 75 203 266 XP_057309343.1 60S acidic ribosomal protein P0-like [Hydractinia symbiolongicarpus] diamond 951 75.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
30790208 30790208 PRJNA922890_P_NODE_82314_length_228_cov_3.477987_g81904_i0 PRJNA922890 82314 228 3.477987 7.92981036 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.6 2.32e-5   NR XP_048582845.1 45351 g81904 i0 54.8 1.06578947368421 42 19 55.3 0 228 103 334 375 XP_048582845.1 ubiquitin carboxyl-terminal hydrolase 14 [Nematostella vectensis] diamond 243 52 0.992307692307692 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
31232389 31232389 PRJNA922890_P_NODE_84015_length_228_cov_0.905660_g83605_i0 PRJNA922890 84015 228 0.90566 2.0649048 Metazoa 33208 Cnidaria other_Eukaryota 99 5.93e-24   NR XP_015754731.1 70779 g83605 i0 77.3 20.2105263157895 66 15 86.8 0 198 1 79 144 XP_015754731.1 PREDICTED: 60S ribosomal protein L17-like isoform X1 [Acropora digitifera] diamond 4608 99.8 0.991983967935872 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;