RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA922890" and tax_clade = "Metamonada"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA922890 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17476768 17476768 PRJNA922890_P_NODE_70994_length_234_cov_0.884848_g70584_i0 PRJNA922890 70994 234 0.884848 2.07054432 Giardia duodenalis 5741 Fornicata other_Eukaryota 207 4.23e-49   NTclustered gi|159112021|ref|XM_001706189.1| 5741 g70584 i0 84.36 0.901709401709402 211 33 90 0 24 234 359 149 Giardia intestinalis Dynein intermediate chain (GL50803_0033218), partial mRNA blastn 211 207 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
27656716 27656716 PRJNA922890_P_NODE_77364_length_231_cov_0.901235_g76954_i0 PRJNA922890 77364 231 0.901235 2.08185285 Giardia intestinalis 5741 Fornicata other_Eukaryota 130 2.45e-34   NR XP_001706436.1 5741 g76954 i0 81.8 1.97402597402597 77 14 100 0 1 231 73 149 XP_001706436.1 hypothetical protein GL50803_009861 [Giardia intestinalis] diamond 456 130 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30814526 30814526 PRJNA922890_P_NODE_77334_length_231_cov_0.901235_g76924_i0 PRJNA922890 77334 231 0.901235 2.08185285 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 44.7 0.00669   NR KAJ5080121.1 1746090 g76924 i0 34.3 5.96103896103896 70 40 83.1 2 198 7 173 242 KAJ5080121.1 regulator of chromosome condensation [Anaeramoeba ignava] diamond 1377 44.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31984408 31984408 PRJNA922890_P_NODE_77098_length_231_cov_0.901235_g76688_i0 PRJNA922890 77098 231 0.901235 2.08185285 Giardia intestinalis 5741 Fornicata other_Eukaryota 95.5 5e-21   NR XP_037901674.1 5741 g76688 i0 53.9 2.93506493506493 76 35 98.7 0 231 4 150 225 XP_037901674.1 High cysteine membrane protein [Giardia intestinalis] diamond 678 95.5 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;