RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA922890" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA922890 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3448397 3448397 PRJNA922890_P_NODE_14863_length_496_cov_1.672131_g14455_i0 PRJNA922890 14863 496 1.672131 8.29376976 Patescibacteria group bacterium 2052139 Bacteria Bacteria 152 4.639999999999999e-32   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g14455 i0 78.689 43.2600806451613 244 41 48 9 2 237 429586 429346 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 21457 152 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
12731397 12731397 PRJNA922890_P_NODE_47770_length_282_cov_1.352113_g47360_i0 PRJNA922890 47770 282 1.352113 3.81295866 Bacteria 2 Bacteria Bacteria 521 1.6499999999999996e-143   NTclustered gi|402243568|gb|JX294354.1| 1226340 g47360 i0 100 99.9716312056738 282 0 100 0 1 282 1074 1355 GN02 bacterium oral taxon 873 clone 4Q04 16S ribosomal RNA gene, partial sequence blastn 28192 521 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Gracilibacteria bacterium oral taxon 873
17476879 17476879 PRJNA922890_P_NODE_78154_length_231_cov_0.888889_g77744_i0 PRJNA922890 78154 231 0.888889 2.05333359 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 233 6.87e-57   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g77744 i0 84.979 90.7489177489177 233 31 100 3 1 231 813230 813460 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 20963 233 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
26834901 26834901 PRJNA922890_P_NODE_81801_length_229_cov_0.900000_g81391_i0 PRJNA922890 81801 229 0.9 2.061 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 66.6 1.2e-10   NR HGE73204.1 2026781 g81391 i0 43.2 2.882096069869 74 41 96.9 1 4 225 406 478 HGE73204.1 DUF4062 domain-containing protein [Candidatus Poribacteria bacterium] diamond 660 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;