RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA917598", tax_phylum = "Pisuviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA917598 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8550246 8550246 PRJNA917598_P_NODE_95927_length_241_cov_0.916667_g94983_i0 PRJNA917598 95927 241 0.916667 2.20916747 Varroa dicistrovirus 1 2873561 Viruses Viruses 363 8.819999999999997e-96   NTclustered gi|2111829789|gb|MZ822069.1| 2873561 g94983 i0 93.802 1.00414937759336 242 13 100 2 1 241 3859 3619 MAG: Varroa dicistrovirus 1 isolate No3-Mi012-HB2018-11, complete genome blastn 242 363 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Varroa dicistrovirus 1
11455036 11455036 PRJNA917598_P_NODE_32129_length_406_cov_0.924925_g31185_i0 PRJNA917598 32129 406 0.924925 3.7551955 Comovirus 12258 Viruses Viruses 604 2.379999999999999e-168   NTclustered gi|2500669020|ref|NC_078591.1| 2570606 g31185 i0 93.58 2.99261083743842 405 26 99 0 1 405 3033 2629 Arabidopsis latent virus-1 segment RNA2, complete sequence blastn 1215 604 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Comovirus Comovirus arabidopsis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;