RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA917598" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA917598 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29866769 29866769 PRJNA917598_P_NODE_92791_length_243_cov_0.905882_g91847_i0 PRJNA917598 92791 243 0.905882 2.20129326 Fidelibacterota bacterium 2026760 Bacteria Bacteria 58.5 7.46e-8   NR MBD25289.1 2026760 g91847 i0 41 1.8641975308642 78 39 87.7 2 217 5 34 111 MBD25289.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Fidelibacterota bacterium] diamond 453 58.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30688040 30688040 PRJNA917598_P_NODE_84613_length_248_cov_0.880000_g83669_i0 PRJNA917598 84613 248 0.88 2.1824 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.9 0.015   NR MCH8289389.1 2026760 g83669 i0 35.4 0.786290322580645 65 37 73.8 2 23 205 24 87 MCH8289389.1 metallophosphoesterase [Fidelibacterota bacterium] diamond 195 43.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30972646 30972646 PRJNA917598_P_NODE_86774_length_247_cov_0.885057_g85830_i0 PRJNA917598 86774 247 0.885057 2.18609079 Fidelibacterota bacterium 2026760 Bacteria Bacteria 142 4.769999999999999e-37   NR MFL2995072.1 2026760 g85830 i0 87.8 0.995951417004049 82 10 99.6 0 2 247 33 114 MFL2995072.1 FG-GAP-like repeat-containing protein [Fidelibacterota bacterium] diamond 246 142 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;