RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA917598", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13650798 13650798 PRJNA917598_P_NODE_89811_length_245_cov_0.895349_g88867_i0 PRJNA917598 89811 245 0.895349 2.19360505 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|690579689|emb|LN130672.1| 99802 g88867 i0 100 0.342857142857143 28 0 11 0 186 213 1491 1518 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei, scaffold SPER_contig0009861 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21297277 21297277 PRJNA917598_P_NODE_13937_length_632_cov_1.701252_g13005_i0 PRJNA917598 13937 632 1.701252 10.75191264 Protopolystoma xenopodis 117903 Platyhelminthes Platyhelminthes 241 1.78e-77   NR VEL29129.1 117903 g13005 i0 69.9 16.2341772151899 166 50 78.8 0 15 512 29 194 VEL29129.1 unnamed protein product [Protopolystoma xenopodis] diamond 10260 241 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Polystomatidea Polystomatidae Protopolystoma Protopolystoma xenopodis
27758813 27758813 PRJNA917598_P_NODE_72884_length_266_cov_1.243523_g71940_i0 PRJNA917598 72884 266 1.243523 3.30777118 Diphyllobothriidae 28843 Platyhelminthes Platyhelminthes 91.3 1.2e-20   NR VDN24685.1 60516 g71940 i0 48.8 2.8984962406015 86 43 95.9 1 1 255 11 96 VDN24685.1 unnamed protein product [Dibothriocephalus latus] diamond 771 91.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Dibothriocephalus Dibothriocephalus latus
29842375 29842375 PRJNA917598_P_NODE_87511_length_246_cov_0.890173_g86567_i0 PRJNA917598 87511 246 0.890173 2.18982558 Opisthokonta 33154 Platyhelminthes Platyhelminthes 45.4 0.00384   NR KAL3316124.1 1844966 g86567 i0 38.5 1.85365853658537 78 47 95.1 1 243 10 139 215 KAL3316124.1 Transportin-1 [Cichlidogyrus casuarinus] diamond 456 45.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Monogenea Dactylogyridea Ancyrocephalidae Cichlidogyrus Cichlidogyrus casuarinus
31383577 31383577 PRJNA917598_P_NODE_80316_length_251_cov_0.865169_g79372_i0 PRJNA917598 80316 251 0.865169 2.17157419 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 72 2.29e-14   NR XP_018645255.1 6183 g79372 i0 50 1.63745019920319 68 34 81.3 0 41 244 3 70 XP_018645255.1 Selenoprotein W, putative [Schistosoma mansoni] diamond 411 72 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
31707018 31707018 PRJNA917598_P_NODE_67777_length_276_cov_2.201970_g66833_i0 PRJNA917598 67777 276 2.20197 6.0774372 Opisthokonta 33154 Platyhelminthes Platyhelminthes 140 3.4499999999999995e-37   NR CDS37564.1 6211 g66833 i0 72.5 50.4239130434783 91 22 98.9 1 3 275 268 355 CDS37564.1 elongator complex protein 3 [Echinococcus multilocularis] diamond 13917 141 0.99290780141844 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis
32395877 32395877 PRJNA917598_P_NODE_67499_length_277_cov_1.392157_g66555_i0 PRJNA917598 67499 277 1.392157 3.85627489 Schistocephalus solidus 70667 Platyhelminthes Platyhelminthes 98.2 3.8099999999999996e-23   NR VDL89772.1 70667 g66555 i0 61.5 2.56678700361011 78 28 84.5 1 275 42 134 209 VDL89772.1 unnamed protein product [Schistocephalus solidus] diamond 711 98.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Schistocephalus Schistocephalus solidus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;