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contig_metadata

10 rows where bioproject = "PRJNA917598", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 10 ✖

tax_kingdom 1

  • Metazoa · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA917598 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11099325 11099325 PRJNA917598_P_NODE_34549_length_391_cov_0.842767_g33605_i0 PRJNA917598 34549 391 0.842767 3.29521897 Strongyloides papillosus 174720 Nematoda Nematoda 195 5.87e-45   NTclustered gi|687022675|emb|LM525589.1| 174720 g33605 i0 83.575 35.7800511508951 207 34 53 0 184 390 172352 172146 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000012 blastn 13990 195 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
11099399 11099399 PRJNA917598_P_NODE_37449_length_375_cov_1.529801_g36505_i0 PRJNA917598 37449 375 1.529801 5.73675375 Plectonchus hunti 345504 Nematoda Nematoda 52.8 0.036   NTclustered gi|76560675|gb|DQ145700.1| 345504 g36505 i0 100 0.149333333333333 28 0 7 0 348 375 357 330 Plectonchus hunti 28S ribosomal RNA gene, partial sequence blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Plectonchus Plectonchus hunti
11099998 11099998 PRJNA917598_P_NODE_60489_length_290_cov_1.350230_g59545_i0 PRJNA917598 60489 290 1.35023 3.915667 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 115 1.25e-27   NR VDM91780.1 42156 g59545 i0 58.3 11.2758620689655 96 38 97.2 1 7 288 148 243 VDM91780.1 unnamed protein product [Litomosoides sigmodontis] diamond 3270 115 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Litomosoides Litomosoides sigmodontis
20023776 20023776 PRJNA917598_P_NODE_87016_length_246_cov_1.768786_g86072_i0 PRJNA917598 87016 246 1.768786 4.35121356 Rhabditidoides sp. RS5443 669111 Nematoda Nematoda 137 5.96e-28   NTclustered gi|256709203|gb|GQ422254.1| 669111 g86072 i0 81.609 16.7276422764228 174 25 69 7 10 178 9 180 Rhabditidoides sp. RS5443 small subunit ribosomal protein 28 (rps-28) mRNA, partial cds blastn 4115 137 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Rhabditidoides Rhabditidoides sp. RS5443
29203772 29203772 PRJNA917598_P_NODE_12889_length_659_cov_0.918089_g11962_i0 PRJNA917598 12889 659 0.918089 6.05020651 Ancylostoma duodenale 51022 Nematoda Nematoda 149 5.41e-40   NR KIH50104.1 51022 g11962 i0 39.2 0.965098634294385 212 88 96.1 3 22 654 2 173 KIH50104.1 hypothetical protein ANCDUO_19820, partial [Ancylostoma duodenale] diamond 636 149 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
29613745 29613745 PRJNA917598_P_NODE_91830_length_243_cov_2.523529_g90886_i0 PRJNA917598 91830 243 2.523529 6.13217547 Meloidogyne graminicola 189291 Nematoda Nematoda 45.4 0.00256   NR KAF7635541.1 189291 g90886 i0 36.4 0.814814814814815 66 38 77.8 2 200 12 19 83 KAF7635541.1 hypothetical protein Mgra_00005083 [Meloidogyne graminicola] diamond 198 45.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
30656513 30656513 PRJNA917598_P_NODE_65913_length_280_cov_1.367150_g64969_i0 PRJNA917598 65913 280 1.36715 3.82802 Caenorhabditis auriculariae 2777116 Nematoda Nematoda 54.3 5.09e-6   NR CAD6198104.1 2777116 g64969 i0 60.5 0.814285714285714 38 15 40.7 0 5 118 119 156 CAD6198104.1 unnamed protein product [Caenorhabditis auriculariae] diamond 228 54.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis auriculariae
30853391 30853391 PRJNA917598_P_NODE_79774_length_251_cov_0.865169_g78830_i0 PRJNA917598 79774 251 0.865169 2.17157419 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.5 9.38e-9   NR MFH4983589.1 75299 g78830 i0 38.5 5.64143426294821 78 47 92 1 241 11 10 87 MFH4983589.1 hypothetical protein [Gnathostoma spinigerum] diamond 1416 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Gnathostomatidae Gnathostoma Gnathostoma spinigerum
31668032 31668032 PRJNA917598_P_NODE_65957_length_280_cov_1.294686_g65013_i0 PRJNA917598 65957 280 1.294686 3.6251208 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 49.3 2.65e-4   NR KAI6170845.1 293665 g65013 i0 27.2 1.77857142857143 92 65 98.6 1 280 5 100 189 KAI6170845.1 Na-H-Exchanger domain-containing protein [Aphelenchoides bicaudatus] diamond 498 49.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
32648190 32648190 PRJNA917598_P_NODE_84300_length_248_cov_0.880000_g83356_i0 PRJNA917598 84300 248 0.88 2.1824 Dirofilaria immitis 6287 Nematoda Nematoda 45.4 0.00279   NR MCP9259222.1 6287 g83356 i0 65.7 0.423387096774194 35 12 42.3 0 135 31 93 127 MCP9259222.1 putative serine acetyltransferase [Dirofilaria immitis] diamond 105 45.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;