RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA917598", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA917598 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7275445 7275445 PRJNA917598_P_NODE_94246_length_242_cov_0.911243_g93302_i0 PRJNA917598 94246 242 0.911243 2.20520806 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 375 1.14e-99   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g93302 i0 94.672 629.020661157025 244 10 100 3 1 242 5032129 5031887 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 152223 375 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17474981 17474981 PRJNA917598_P_NODE_73034_length_265_cov_2.312500_g72090_i0 PRJNA917598 73034 265 2.3125 6.128125 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 233 8.059999999999999e-57   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g72090 i0 85.153 3.8377358490566 229 32 86 2 1 228 9527158 9527385 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1017 233 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17475085 17475085 PRJNA917598_P_NODE_7714_length_865_cov_6.112374_g6898_i0 PRJNA917598 7714 865 6.112374 52.8720351 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 797 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g6898 i0 83.634 891.361849710983 886 106 100 34 1 865 5032994 5032127 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 771028 797 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;