RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA917598", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA917598 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7275383 7275383 PRJNA917598_P_NODE_91526_length_244_cov_0.900585_g90582_i0 PRJNA917598 91526 244 0.900585 2.1974274 Halorubrum sp. 2020YC2 2836432 Archaea Archaea 52.8 0.022   NTclustered gi|2047351610|gb|CP076019.1| 2836432 g90582 i0 100 0.114754098360656 28 0 11 0 91 118 1110880 1110907 Halorubrum sp. 2020YC2 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. 2020YC2
14005780 14005780 PRJNA917598_P_NODE_92171_length_243_cov_0.905882_g91227_i0 PRJNA917598 92171 243 0.905882 2.20129326 Haloplanus 376170 Archaea Archaea 52.8 0.022   NTclustered gi|1785199060|gb|CP034345.1| 1816183 g91227 i0 96.774 0.255144032921811 31 1 13 0 44 74 846437 846467 Haloplanus rallus strain MBLA0036 chromosome, complete genome blastn 62 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloplanus Haloplanus rallus
29014485 29014485 PRJNA917598_P_NODE_43748_length_347_cov_1.660584_g42804_i0 PRJNA917598 43748 347 1.660584 5.76222648 Halorarius halobius 2962671 Archaea Archaea 45.1 0.0188   NR WP_255149426.1 2962671 g42804 i0 32.3 0.804034582132565 93 63 80.4 0 320 42 730 822 WP_255149426.1 AAA domain-containing protein [Halorarius halobius] diamond 279 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Halorarius Halorarius halobius
30467319 30467319 PRJNA917598_P_NODE_80153_length_251_cov_0.865169_g79209_i0 PRJNA917598 80153 251 0.865169 2.17157419 Methanoregulaceae archaeon 2485498 Archaea Archaea 44.3 0.0112   NR HOT94242.1 2485498 g79209 i0 47.9 0.573705179282869 48 13 57.4 2 101 244 298 333 HOT94242.1 radical SAM protein [Methanoregulaceae archaeon] diamond 144 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;