contig_metadata
10 rows where bioproject = "PRJNA917598", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13650592 | 13650592 | PRJNA917598_P_NODE_80631_length_251_cov_0.865169_g79687_i0 | PRJNA917598 | 80631 | 251 | 0.865169 | 2.17157419 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 113 | 2.9400000000000004e-27 | NR | HKG90379.1 | 2026741 | g79687 | i0 | 69.9 | 0.99203187250996006 | 83 | 25 | 99.2 | 0 | 251 | 3 | 200 | 282 | HKG90379.1 DUF58 domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 249 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 16200075 | 16200075 | PRJNA917598_P_NODE_89653_length_245_cov_0.895349_g88709_i0 | PRJNA917598 | 89653 | 245 | 0.895349 | 2.19360505 | uncultured Gemmatimonas sp. | 221169 | Bacteria | Bacteria | 313 | 9.19e-81 | NTclustered | gi|219810732|gb|FJ550946.1| | 221169 | g88709 | i0 | 97.802 | 29.5020408163265 | 182 | 2 | 74 | 2 | 64 | 245 | 933 | 754 | Uncultured Gemmatimonas sp. clone LTSP_BACT_P1N12 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 7228 | 313 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | uncultured Gemmatimonas sp. | |
| 22929288 | 22929288 | PRJNA917598_P_NODE_70198_length_271_cov_2.500000_g69254_i0 | PRJNA917598 | 70198 | 271 | 2.5 | 6.775 | Gemmatimonas | 173479 | Bacteria | Bacteria | 468 | 2.08e-127 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g69254 | i0 | 97.786 | 130.571955719557 | 271 | 6 | 100 | 0 | 1 | 271 | 974 | 1244 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 35385 | 468 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 27095110 | 27095110 | PRJNA917598_P_NODE_89302_length_245_cov_0.895349_g88358_i0 | PRJNA917598 | 89302 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 110 | 3.87e-26 | NR | WP_170034272.1 | 1639882 | g88358 | i0 | 72 | 3.6734693877551 | 75 | 21 | 91.8 | 0 | 16 | 240 | 257 | 331 | WP_170034272.1 MATE family efflux transporter [Longimicrobium terrae] | diamond | 900 | 111 | 0.990990990990991 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium terrae | |
| 28982827 | 28982827 | PRJNA917598_P_NODE_60108_length_291_cov_1.059633_g59164_i0 | PRJNA917598 | 60108 | 291 | 1.059633 | 3.08353203 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 89.4 | 3.7e-19 | NR | MBW3572569.1 | 2026742 | g59164 | i0 | 52 | 1.05154639175258 | 102 | 38 | 99 | 2 | 3 | 290 | 134 | 230 | MBW3572569.1 DUF2382 domain-containing protein [Gemmatimonadota bacterium] | diamond | 306 | 89.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 29930089 | 29930089 | PRJNA917598_P_NODE_84731_length_248_cov_0.880000_g83787_i0 | PRJNA917598 | 84731 | 248 | 0.88 | 2.1824 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 70.9 | 4.1e-12 | NR | MCK5489653.1 | 2026742 | g83787 | i0 | 44.6 | 0.895161290322581 | 74 | 41 | 89.5 | 0 | 18 | 239 | 199 | 272 | MCK5489653.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 222 | 70.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30404232 | 30404232 | PRJNA917598_P_NODE_47713_length_332_cov_1.239382_g46769_i0 | PRJNA917598 | 47713 | 332 | 1.239382 | 4.11474824 | Longimicrobiaceae bacterium | 3047548 | Bacteria | Bacteria | 61.2 | 3.3e-8 | NR | HEV2132607.1 | 3047548 | g46769 | i0 | 38.7 | 0.957831325301205 | 106 | 57 | 88.6 | 2 | 26 | 319 | 207 | 312 | HEV2132607.1 SWIM zinc finger family protein [Longimicrobiaceae bacterium] | diamond | 318 | 61.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobiaceae bacterium | ||
| 31130196 | 31130196 | PRJNA917598_P_NODE_8115_length_843_cov_1.597403_g7284_i0 | PRJNA917598 | 8115 | 843 | 1.597403 | 13.46610729 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 96.7 | 1.58e-19 | NR | HEX2210215.1 | 2029185 | g7284 | i0 | 47.4 | 2.355871886121 | 114 | 59 | 40.2 | 1 | 741 | 403 | 135 | 248 | HEX2210215.1 DUF2382 domain-containing protein [Longimicrobium sp.] | diamond | 1986 | 96.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 31256928 | 31256928 | PRJNA917598_P_NODE_93475_length_242_cov_1.603550_g92531_i0 | PRJNA917598 | 93475 | 242 | 1.60355 | 3.880591 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 42.4 | 0.0487 | NR | MBP2646773.1 | 2026742 | g92531 | i0 | 44.4 | 0.669421487603306 | 54 | 27 | 63.2 | 1 | 74 | 226 | 116 | 169 | MBP2646773.1 hypothetical protein [Gemmatimonadota bacterium] | diamond | 162 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32750227 | 32750227 | PRJNA917598_P_NODE_16420_length_579_cov_1.393281_g15486_i0 | PRJNA917598 | 16420 | 579 | 1.393281 | 8.06709699 | Gemmatimonadota | 142182 | Bacteria | Bacteria | 71.2 | 7.47e-11 | NR | HKH91170.1 | 2026741 | g15486 | i0 | 52.6 | 1.39378238341969 | 76 | 36 | 39.4 | 0 | 578 | 351 | 238 | 313 | HKH91170.1 DUF2382 domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 807 | 71.6 | 0.994413407821229 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;