RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA917598", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA917598 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12374845 12374845 PRJNA917598_P_NODE_29490_length_424_cov_1.216524_g28546_i0 PRJNA917598 29490 424 1.216524 5.15806176 Minisyncoccota bacterium 2053589 Bacteria Bacteria 88.6 2.62e-17   NR MDD3729199.1 2053589 g28546 i0 50.6 0.629716981132076 89 44 63 0 268 2 376 464 MDD3729199.1 N-6 DNA methylase [Candidatus Paceibacterota bacterium] diamond 267 88.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29140672 29140672 PRJNA917598_P_NODE_26669_length_447_cov_1.149733_g25725_i0 PRJNA917598 26669 447 1.149733 5.13930651 Minisyncoccota bacterium 2053589 Bacteria Bacteria 160 6.589999999999999e-48   NR MDR3570671.1 2053589 g25725 i0 78.5 0.718120805369127 107 22 71.1 1 442 125 1 107 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 321 160 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30909391 30909391 PRJNA917598_P_NODE_12354_length_674_cov_2.645591_g11433_i0 PRJNA917598 12354 674 2.645591 17.83128334 Minisyncoccia bacterium 3120121 Bacteria Bacteria 159 6.15e-44   NR MFB6226514.1 3120121 g11433 i0 45.5 0.890207715133531 200 108 88.6 1 67 663 43 242 MFB6226514.1 decaprenyl-phosphate phosphoribosyltransferase [Minisyncoccia bacterium] diamond 600 159 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia       Minisyncoccia bacterium
31636417 31636417 PRJNA917598_P_NODE_62376_length_286_cov_2.169014_g61432_i0 PRJNA917598 62376 286 2.169014 6.20338004 Minisyncoccota bacterium 2053589 Bacteria Bacteria 56.6 7.7e-7   NR MCK5589027.1 2053589 g61432 i0 66.7 0.409090909090909 39 13 40.9 0 284 168 302 340 MCK5589027.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 117 56.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;