RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA917598", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA917598 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25122531 25122531 PRJNA917598_P_NODE_59900_length_291_cov_2.004587_g58956_i0 PRJNA917598 59900 291 2.004587 5.83334817 Thecamonas trahens 529818 Root_unresolved Root_unresolved 248 3.2e-61   NTclustered gi|761380055|ref|NC_026452.1| 529818 g58956 i0 82.566 28.5463917525773 304 32 100 17 1 291 29099 29394 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 8307 248 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27877483 27877483 PRJNA917598_P_NODE_53685_length_311_cov_2.668067_g52741_i0 PRJNA917598 53685 311 2.668067 8.29768837 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 118 1.51e-30   NR XP_013754328.1 461836 g52741 i0 55.3 8.88424437299035 103 46 99.4 0 1 309 49 151 XP_013754328.1 60S ribosomal protein L7 [Thecamonas trahens ATCC 50062] diamond 2763 118 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29676900 29676900 PRJNA917598_P_NODE_88450_length_246_cov_0.890173_g87506_i0 PRJNA917598 88450 246 0.890173 2.18982558 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 154 1.27e-45   NR XP_013760036.1 461836 g87506 i0 89 1 82 9 100 0 1 246 49 130 XP_013760036.1 Ras-like protein rasG [Thecamonas trahens ATCC 50062] diamond 246 154 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32427482 32427482 PRJNA917598_P_NODE_57599_length_299_cov_1.022124_g56655_i0 PRJNA917598 57599 299 1.022124 3.05615076 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 50.8 1.09e-4   NR XP_013761416.1 461836 g56655 i0 47.8 0.461538461538462 46 24 46.2 0 143 6 3943 3988 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 138 50.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;