RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA915212" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26771375 26771375 PRJNA915212_P_NODE_13961_length_163_cov_0.894737_g13923_i0 PRJNA915212 13961 163 0.894737 1.45842131 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 58.5 3.38e-8   NR MCX6135144.1 2049428 g13923 i0 53.7 0.993865030674847 54 25 99.4 0 162 1 637 690 MCX6135144.1 T9SS type A sorting domain-containing protein [Ignavibacteriales bacterium] diamond 162 58.5 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
28263498 28263498 PRJNA915212_P_NODE_6326_length_233_cov_1.641304_g6288_i0 PRJNA915212 6326 233 1.641304 3.82423832 root 1 Root_unresolved Root_unresolved 67.4 6.33e-11   NR MEO8512008.1 2053306 g6288 i0 45.5 4.57081545064378 77 38 99.1 2 2 232 1 73 MEO8512008.1 fumarylacetoacetase [Ignavibacteria bacterium] diamond 1065 67.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30341066 30341066 PRJNA915212_P_NODE_2212_length_442_cov_2.829517_g2176_i0 PRJNA915212 2212 442 2.829517 12.50646514 Ignavibacteria bacterium 2053306 Bacteria Bacteria 46.2 0.018   NR HEY3249713.1 2053306 g2176 i0 29.1 0.909502262443439 134 76 90.3 5 408 10 412 527 HEY3249713.1 M14 family zinc carboxypeptidase [Ignavibacteria bacterium] diamond 402 46.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;