RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA915212", tax_kingdom = "Thermotogati" and tax_superkingdom = "Bacteria"

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tax_phylum 2

tax_superkingdom 1

  • Bacteria · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
895032 895032 PRJNA915212_P_NODE_11981_length_167_cov_0.864407_g11943_i0 PRJNA915212 11981 167 0.864407 1.44355969 root 1 Root_unresolved Root_unresolved 82 1.86e-16   NR WP_009201535.1 49894 g11943 i0 66.7 75.2874251497006 54 18 97 0 167 6 263 316 WP_009201535.1 MULTISPECIES: chaperonin GroEL [Acetomicrobium] diamond 12573 82 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Acetomicrobiaceae Acetomicrobium  
31264231 31264231 PRJNA915212_P_NODE_7635_length_211_cov_1.512346_g7597_i0 PRJNA915212 7635 211 1.512346 3.19105006 root 1 Root_unresolved Root_unresolved 83.2 1.38e-16   NR WP_126170995.1 37636 g7597 i0 58 6.83886255924171 69 29 98.1 0 210 4 323 391 WP_126170995.1 aconitate hydratase AcnA, partial [Thermus scotoductus] diamond 1443 83.6 0.995215311004785 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus scotoductus
31794358 31794358 PRJNA915212_P_NODE_6677_length_226_cov_1.728814_g6639_i0 PRJNA915212 6677 226 1.728814 3.90711964 Synergistales bacterium 2268201 Bacteria Bacteria 63.2 4.23e-10   NR GHS98091.1 2268201 g6639 i0 45.5 3.1858407079646 77 33 95.6 3 219 4 22 94 GHS98091.1 tellurium resistance protein TerZ [Synergistales bacterium] diamond 720 63.2 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales     Synergistales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;