RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA915212", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27877432 27877432 PRJNA915212_P_NODE_15045_length_161_cov_0.910714_g15007_i0 PRJNA915212 15045 161 0.910714 1.46624954 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 68.6 8.87e-12   NR PJF18793.1 1246581 g15007 i0 59.6 1.99378881987578 52 20 96.9 1 1 156 14 64 PJF18793.1 hypothetical protein PSACC_01405 [Paramicrosporidium saccamoebae] diamond 321 68.6 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31011333 31011333 PRJNA915212_P_NODE_10474_length_178_cov_1.186047_g10436_i0 PRJNA915212 10474 178 1.186047 2.11116366 Opisthokonta 33154 Fungi Fungi 77.4 2.37e-16   NR EPZ31907.1 988480 g10436 i0 64.4 7.95505617977528 59 20 99.4 1 178 2 37 94 EPZ31907.1 60S ribosomal protein L26-2 [Rozella allomycis CSF55] diamond 1416 77.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31707011 31707011 PRJNA915212_P_NODE_8917_length_195_cov_1.123288_g8879_i0 PRJNA915212 8917 195 1.123288 2.1904116 root 1 Root_unresolved Root_unresolved 42.7 0.017   NR PJF18071.1 1246581 g8879 i0 46.3 3.43076923076923 54 24 83.1 1 2 163 111 159 PJF18071.1 putative membrane protein [Paramicrosporidium saccamoebae] diamond 669 43.1 0.990719257540603 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;