RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA915212", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA915212 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29676812 29676812 PRJNA915212_P_NODE_210_length_1350_cov_4.601076_g198_i0 PRJNA915212 210 1350 4.601076 62.114526 Mycoplasmataceae bacterium 2685873 Bacteria Bacteria 54.3 9.11e-4   NR MBR2022330.1 2685873 g198 i0 20.9 0.66 297 193 62.9 5 1203 355 34 302 MBR2022330.1 hypothetical protein [Mycoplasmataceae bacterium] diamond 891 54.3 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae   Mycoplasmataceae bacterium
30063399 30063399 PRJNA915212_P_NODE_7611_length_212_cov_0.938650_g7573_i0 PRJNA915212 7611 212 0.93865 1.989938 Bacillati 1783272 Bacteria Bacteria 81.6 5.35e-17   NR WP_028126373.1 209274 g7573 i0 62.5 7.66981132075472 64 24 90.6 0 19 210 149 212 WP_028126373.1 deoxyribose-phosphate aldolase [Williamsoniiplasma lucivorax] diamond 1626 81.6 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales   Williamsoniiplasma Williamsoniiplasma lucivorax

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;