RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA915212", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA915212 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27814527 27814527 PRJNA915212_P_NODE_14524_length_162_cov_0.902655_g14486_i0 PRJNA915212 14524 162 0.902655 1.4623011 Chthonomonadales bacterium 2282151 Bacteria Bacteria 55.8 2.47e-7   NR HXG23262.1 2282151 g14486 i0 50.9 2 55 24 96.3 1 157 2 89 143 HXG23262.1 S1/P1 nuclease [Chthonomonadales bacterium] diamond 324 55.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
30751338 30751338 PRJNA915212_P_NODE_3934_length_309_cov_1.765385_g3896_i0 PRJNA915212 3934 309 1.765385 5.45503965 Armatimonadota bacterium 2033014 Bacteria Bacteria 47.4 0.00167   NR MBI1332933.1 2033014 g3896 i0 34.6 1.89320388349515 78 50 75.7 1 235 2 149 225 MBI1332933.1 choice-of-anchor A family protein [Armatimonadota bacterium] diamond 585 47.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31478473 31478473 PRJNA915212_P_NODE_8856_length_196_cov_1.040816_g8818_i0 PRJNA915212 8856 196 1.040816 2.03999936 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 63.9 3.14e-10   NR MBX7132864.1 2682144 g8818 i0 47.8 2.02040816326531 67 29 99.5 2 195 1 60 122 MBX7132864.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Fimbriimonadaceae bacterium] diamond 396 63.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;