RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA915212", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA915212 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28579541 28579541 PRJNA915212_P_NODE_8487_length_200_cov_1.013245_g8449_i0 PRJNA915212 8487 200 1.013245 2.02649 Bacteria 2 Bacteria Bacteria 45.8 0.00175   NR HPO15378.1 2030809 g8449 i0 42.6 4.125 61 32 91.5 2 200 18 498 555 HPO15378.1 M14 family zinc carboxypeptidase [Candidatus Hydrogenedentota bacterium] diamond 825 46.2 0.991341991341991 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30656452 30656452 PRJNA915212_P_NODE_8453_length_200_cov_1.350993_g8415_i0 PRJNA915212 8453 200 1.350993 2.701986 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 52.8 6.21e-6   NR HOF39387.1 2030809 g8415 i0 34.4 5.76 64 42 96 0 8 199 144 207 HOF39387.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 1152 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;