RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA915212", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA915212 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28729995 28729995 PRJNA915212_P_NODE_10587_length_177_cov_1.195312_g10549_i0 PRJNA915212 10587 177 1.195312 2.11570224 Minisyncoccota bacterium 2053589 Bacteria Bacteria 46.6 1.6e-4   NR MDR3570671.1 2053589 g10549 i0 52.4 1.06779661016949 63 24 96.6 1 2 172 34 96 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 189 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30182509 30182509 PRJNA915212_P_NODE_7632_length_211_cov_1.574074_g7594_i0 PRJNA915212 7632 211 1.574074 3.32129614 Minisyncoccota bacterium 2053589 Bacteria Bacteria 125 1.79e-35   NR MDR3570670.1 2053589 g7594 i0 81.7 1.00947867298578 71 11 98.1 1 4 210 5 75 MDR3570670.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 213 125 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;