RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA915212", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA915212 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28856094 28856094 PRJNA915212_P_NODE_2448_length_418_cov_1.924119_g2412_i0 PRJNA915212 2448 418 1.924119 8.04281742 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 48.5 0.00212   NR MDG2306814.1 2838779 g2412 i0 38 2.55502392344498 108 49 71.1 5 416 120 341 439 MDG2306814.1 hypothetical protein [Candidatus Binatia bacterium] diamond 1068 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31446693 31446693 PRJNA915212_P_NODE_9616_length_187_cov_1.478261_g9578_i0 PRJNA915212 9616 187 1.478261 2.76434807 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.7 0.00371   NR MDZ4343907.1 2838779 g9578 i0 53.4 0.93048128342246 58 26 91.4 1 172 2 247 304 MDZ4343907.1 hypothetical protein [Candidatus Binatia bacterium] diamond 174 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;