RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA915212", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA915212 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28105686 28105686 PRJNA915212_P_NODE_10765_length_175_cov_1.214286_g10727_i0 PRJNA915212 10765 175 1.214286 2.1250005 Bacteria 2 Bacteria Bacteria 40.8 0.0312   NR MCD6193003.1 2052149 g10727 i0 38.9 2.67428571428571 54 33 92.6 0 169 8 25 78 MCD6193003.1 Hpt domain-containing protein [Candidatus Aminicenantes bacterium] diamond 468 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29045798 29045798 PRJNA915212_P_NODE_14468_length_162_cov_0.902655_g14430_i0 PRJNA915212 14468 162 0.902655 1.4623011 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 52.4 3.92e-6   NR MBM3297791.1 2052149 g14430 i0 87 0.425925925925926 23 3 42.6 0 88 20 4 26 MBM3297791.1 phosphoserine transaminase [Candidatus Aminicenantes bacterium] diamond 69 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
29779199 29779199 PRJNA915212_P_NODE_2771_length_386_cov_1.059347_g2735_i0 PRJNA915212 2771 386 1.059347 4.08907942 Bacillati 1783272 Bacteria Bacteria 59.3 2.64e-7   NR MCJ7563989.1 2052149 g2735 i0 63.3 1.14248704663212 49 17 38.1 1 374 228 69 116 MCJ7563989.1 6-bladed beta-propeller [Candidatus Aminicenantes bacterium] diamond 441 59.7 0.993299832495812 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
31098687 31098687 PRJNA915212_P_NODE_5255_length_260_cov_1.208531_g5217_i0 PRJNA915212 5255 260 1.208531 3.1421806 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 51.2 4.27e-5   NR MCX6578907.1 2052149 g5217 i0 42.4 0.761538461538461 66 35 76.2 1 198 1 153 215 MCX6578907.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 198 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;