RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA914897" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA914897 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29676756 29676756 PRJNA914897_P_NODE_12930_length_506_cov_2.667436_g12508_i0 PRJNA914897 12930 506 2.667436 13.49722616 Thermoplasmatota archaeon 2806419 Archaea Archaea 56.6 7.05e-6   NR MEE3134389.1 2806419 g12508 i0 49.1 1.82608695652174 55 27 32 1 45 206 339 393 MEE3134389.1 exosome complex RNA-binding protein Csl4 [Thermoplasmatota archaeon] diamond 924 56.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30055986 30055986 PRJNA914897_P_NODE_14151_length_477_cov_8.297030_g13729_i0 PRJNA914897 14151 477 8.29703 39.5768331 Thermoplasmatota archaeon 2806419 Archaea Archaea 53.1 1.02e-5   NR HWR63617.1 2806419 g13729 i0 35.1 1.10691823899371 77 50 48.4 0 156 386 17 93 HWR63617.1 thioredoxin family protein [Thermoplasmatota archaeon] diamond 528 53.1 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30309418 30309418 PRJNA914897_P_NODE_9152_length_631_cov_1.844086_g8739_i0 PRJNA914897 9152 631 1.844086 11.63618266 Candidatus Saliniplasma sp. 3080558 Archaea Archaea 52 6.54e-4   NR MFO7793095.1 3080558 g8739 i0 48.9 1.29793977812995 45 23 21.4 0 492 358 274 318 MFO7793095.1 histidine ammonia-lyase [Candidatus Saliniplasma sp.] diamond 819 52 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Candidatus Halarchaeoplasmatales Candidatus Halarchaeoplasmataceae Candidatus Saliniplasma Candidatus Saliniplasma sp.
32490793 32490793 PRJNA914897_P_NODE_34919_length_260_cov_1.133690_g34495_i0 PRJNA914897 34919 260 1.13369 2.947594 Thermoplasmata archaeon 1906666 Archaea Archaea 43.5 0.0158   NR RLF57416.1 1906666 g34495 i0 27.9 1.98461538461538 86 47 87.7 3 27 254 42 122 RLF57416.1 MAG: DNA polymerase elongation subunit (family B), partial [Thermoplasmata archaeon] diamond 516 43.5 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;