RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA914897", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27245737 27245737 PRJNA914897_P_NODE_20823_length_369_cov_1.165541_g20400_i0 PRJNA914897 20823 369 1.165541 4.30084629 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 132 2.94e-33   NR HJU60249.1 2169593 g20400 i0 50.4 5.85365853658537 121 54 98.4 2 368 6 420 534 HJU60249.1 ATP-dependent DNA ligase [Nitrososphaeraceae archaeon] diamond 2160 132 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32047710 32047710 PRJNA914897_P_NODE_4938_length_901_cov_3.844203_g4602_i0 PRJNA914897 4938 901 3.844203 34.63626903 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 49.3 0.0143   NR NDB63976.1 2202732 g4602 i0 43.2 0.146503884572697 44 23 14.7 1 152 21 364 405 NDB63976.1 RING-HC finger protein [Nitrosopumilaceae archaeon] diamond 132 49.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;