RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA914897" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29014421 29014421 PRJNA914897_P_NODE_41748_length_242_cov_1.491124_g41324_i0 PRJNA914897 41748 242 1.491124 3.60852008 Lentisphaerota bacterium 1932692 Bacteria Bacteria 64.3 9.3e-10   NR MBE6392061.1 1932692 g41324 i0 62.5 0.59504132231405 48 18 59.5 0 144 1 260 307 MBE6392061.1 ATP-dependent RNA helicase HrpA [Lentisphaerota bacterium] diamond 144 64.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
29684196 29684196 PRJNA914897_P_NODE_6850_length_750_cov_1.602659_g6472_i0 PRJNA914897 6850 750 1.602659 12.0199425 root 1 Root_unresolved Root_unresolved 57 2.43e-5   NR QSH41515.1 1932692 g6472 i0 25.1 3.564 187 125 68.8 5 42 557 239 425 QSH41515.1 sugar porter family MFS transporter [Lentisphaerota bacterium] diamond 2673 57 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;