RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA914897" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA914897 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27845713 27845713 PRJNA914897_P_NODE_42724_length_241_cov_0.916667_g42300_i0 PRJNA914897 42724 241 0.916667 2.20916747 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 42.7 0.0357   NR MCW8804658.1 2651163 g42300 i0 37.9 0.821576763485477 66 37 77.2 1 20 205 129 194 MCW8804658.1 insulinase family protein [Ignavibacteriaceae bacterium] diamond 198 42.7 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
28231811 28231811 PRJNA914897_P_NODE_7826_length_694_cov_1.922705_g7426_i0 PRJNA914897 7826 694 1.922705 13.3435727 root 1 Root_unresolved Root_unresolved 95.9 5.96e-21   NR MBK7227391.1 2049428 g7426 i0 53.5 1.65561959654179 99 43 42.8 1 365 69 51 146 MBK7227391.1 alpha-ketoglutarate-dependent dioxygenase AlkB [Ignavibacteriales bacterium] diamond 1149 96.3 0.995846313603323 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32648094 32648094 PRJNA914897_P_NODE_4400_length_958_cov_1.702825_g4085_i0 PRJNA914897 4400 958 1.702825 16.3130635 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 48.9 0.0112   NR MCF8413947.1 2614255 g4085 i0 32.2 0.704592901878914 87 44 27.2 2 597 857 120 191 MCF8413947.1 hypothetical protein [Melioribacteraceae bacterium] diamond 675 48.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;