contig_metadata
25 rows where bioproject = "PRJNA914897" and tax_phylum = "Discosea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2170245 | 2170245 | PRJNA914897_P_NODE_23662_length_339_cov_1.154135_g23238_i0 | PRJNA914897 | 23662 | 339 | 1.154135 | 3.91251765 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 134 | 3.7099999999999997e-34 | NR | XP_004345874.1 | 1257118 | g23238 | i0 | 62.1 | 0.911504424778761 | 103 | 38 | 91.2 | 1 | 321 | 13 | 367 | 468 | XP_004345874.1 adenylosuccinate synthase [Acanthamoeba castellanii str. Neff] | diamond | 309 | 134 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 4723306 | 4723306 | PRJNA914897_P_NODE_11784_length_537_cov_1.575431_g11364_i0 | PRJNA914897 | 11784 | 537 | 1.575431 | 8.46006447 | Ripella sp. 805 | 1217113 | Discosea | other_Eukaryota | 817 | 0 | NTclustered | gi|399764202|gb|JQ271713.1| | 1217113 | g11364 | i0 | 94.569 | 99.3929236499069 | 534 | 19 | 99 | 10 | 7 | 537 | 1 | 527 | Ripella sp. 805 18S ribosomal RNA gene, partial sequence | blastn | 53374 | 817 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella sp. 805 | |||
| 17472993 | 17472993 | PRJNA914897_P_NODE_13994_length_481_cov_3.286765_g13572_i0 | PRJNA914897 | 13994 | 481 | 3.286765 | 15.80933965 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 163 | 1.25e-48 | NR | 1PRQ_A | 5755 | g13572 | i0 | 67.2 | 1.55925155925156 | 125 | 41 | 78 | 0 | 452 | 78 | 1 | 125 | 1PRQ_A Chain A, PROFILIN IA [Acanthamoeba castellanii] | diamond | 750 | 163 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 18746407 | 18746407 | PRJNA914897_P_NODE_18375_length_401_cov_3.731707_g17953_i0 | PRJNA914897 | 18375 | 401 | 3.731707 | 14.96414507 | Ripella sp. GP2 | 1217115 | Discosea | other_Eukaryota | 649 | 0 | NTclustered | gi|399764204|gb|JQ271715.1| | 1217115 | g17953 | i0 | 96.01 | 89.8154613466334 | 401 | 13 | 99 | 3 | 2 | 401 | 1073 | 675 | Ripella sp. GP2 18S ribosomal RNA gene, partial sequence | blastn | 36016 | 649 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Ripella | Ripella sp. GP2 | |||
| 18746440 | 18746440 | PRJNA914897_P_NODE_23215_length_343_cov_1.422222_g22791_i0 | PRJNA914897 | 23215 | 343 | 1.422222 | 4.87822146 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 279 | 1.37e-70 | NTclustered | gi|470420395|ref|XM_004337241.1| | 1257118 | g22791 | i0 | 81.556 | 35.3586005830904 | 347 | 56 | 100 | 6 | 1 | 343 | 2389 | 2047 | Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA | blastn | 12128 | 279 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 20021693 | 20021693 | PRJNA914897_P_NODE_41836_length_242_cov_1.035503_g41412_i0 | PRJNA914897 | 41836 | 242 | 1.035503 | 2.50591726 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 130 | 9.79e-26 | NTclustered | gi|470423488|ref|XM_004337555.1| | 1257118 | g41412 | i0 | 82.051 | 51.6487603305785 | 156 | 24 | 64 | 4 | 85 | 238 | 367 | 520 | Acanthamoeba castellanii str. Neff ribosomal protein L23, putative (ACA1_164710), partial mRNA | blastn | 12499 | 130 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 21296825 | 21296825 | PRJNA914897_P_NODE_24577_length_331_cov_0.887597_g24153_i0 | PRJNA914897 | 24577 | 331 | 0.887597 | 2.93794607 | Platyamoeba placida | 3454475 | Discosea | other_Eukaryota | 411 | 4.459999999999999e-110 | NTclustered | gi|33946348|gb|AY294153.1| | 197527 | g24153 | i0 | 89.091 | 100.075528700906 | 330 | 36 | 99 | 0 | 1 | 330 | 871 | 542 | Platyamoeba placida actin mRNA, partial cds | blastn | 33125 | 411 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Platyamoeba | Platyamoeba placida | |||
| 21297038 | 21297038 | PRJNA914897_P_NODE_7277_length_724_cov_1.278034_g6887_i0 | PRJNA914897 | 7277 | 724 | 1.278034 | 9.25296616 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 271 | 3.2099999999999993e-87 | NR | XP_004344704.1 | 1257118 | g6887 | i0 | 61 | 0.849447513812155 | 205 | 80 | 84.9 | 0 | 3 | 617 | 111 | 315 | XP_004344704.1 cytosolic fes cluster assembling factor nbp35, putative [Acanthamoeba castellanii str. Neff] | diamond | 615 | 271 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 23847218 | 23847218 | PRJNA914897_P_NODE_33819_length_266_cov_1.880829_g33395_i0 | PRJNA914897 | 33819 | 266 | 1.880829 | 5.00300514 | Acanthamoeba castellanii | 5755 | Discosea | other_Eukaryota | 191 | 4.940000000000001e-44 | NTclustered | gi|470441552|ref|XM_004339378.1| | 1257118 | g33395 | i0 | 79.924 | 61.9887218045113 | 264 | 49 | 98 | 3 | 3 | 264 | 544 | 283 | Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA | blastn | 16489 | 191 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 26612856 | 26612856 | PRJNA914897_P_NODE_7321_length_721_cov_3.787037_g6930_i0 | PRJNA914897 | 7321 | 721 | 3.787037 | 27.30453677 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 137 | 1.2e-35 | NR | XP_004335873.1 | 1257118 | g6930 | i0 | 49 | 5.51733703190014 | 147 | 70 | 60.3 | 2 | 717 | 283 | 2 | 145 | XP_004335873.1 RNA recognition domain containing protein [Acanthamoeba castellanii str. Neff] | diamond | 3978 | 137 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 26771348 | 26771348 | PRJNA914897_P_NODE_33501_length_268_cov_1.502564_g33077_i0 | PRJNA914897 | 33501 | 268 | 1.502564 | 4.02687152 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 52 | 2.89e-5 | NR | XP_004356561.1 | 1257118 | g33077 | i0 | 37 | 1.67910447761194 | 73 | 40 | 79.5 | 3 | 34 | 246 | 158 | 226 | XP_004356561.1 kelch repeat-containing protein [Acanthamoeba castellanii str. Neff] | diamond | 450 | 52 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 27498620 | 27498620 | PRJNA914897_P_NODE_16423_length_432_cov_1.119777_g16001_i0 | PRJNA914897 | 16423 | 432 | 1.119777 | 4.83743664 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 78.6 | 4.16e-14 | NR | XP_004333171.1 | 1257118 | g16001 | i0 | 60.7 | 12.2847222222222 | 61 | 23 | 42.4 | 1 | 432 | 250 | 258 | 317 | XP_004333171.1 actin-1, putative [Acanthamoeba castellanii str. Neff] | diamond | 5307 | 78.6 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 27656584 | 27656584 | PRJNA914897_P_NODE_31804_length_278_cov_1.317073_g31380_i0 | PRJNA914897 | 31804 | 278 | 1.317073 | 3.66146294 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 133 | 1.5399999999999998e-35 | NR | XP_004336540.1 | 1257118 | g31380 | i0 | 70.5 | 0.949640287769784 | 88 | 26 | 95 | 0 | 2 | 265 | 66 | 153 | XP_004336540.1 sterol 24c-methyltransferase [Acanthamoeba castellanii str. Neff] | diamond | 264 | 133 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 28098361 | 28098361 | PRJNA914897_P_NODE_24405_length_332_cov_1.494208_g23981_i0 | PRJNA914897 | 24405 | 332 | 1.494208 | 4.96077056 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 96.3 | 1.84e-20 | NR | XP_004336565.1 | 1257118 | g23981 | i0 | 38.3 | 0.966867469879518 | 107 | 66 | 96.7 | 0 | 2 | 322 | 2760 | 2866 | XP_004336565.1 Poly(ADP-ribose) polymerase catalytic domain containing protein [Acanthamoeba castellanii str. Neff] | diamond | 321 | 96.3 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 29393090 | 29393090 | PRJNA914897_P_NODE_13029_length_504_cov_1.153132_g12607_i0 | PRJNA914897 | 13029 | 504 | 1.153132 | 5.81178528 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 117 | 1.76e-28 | NR | XP_004336036.1 | 1257118 | g12607 | i0 | 71.1 | 4.52380952380952 | 76 | 20 | 45.2 | 2 | 203 | 430 | 153 | 226 | XP_004336036.1 MTA70 family protein [Acanthamoeba castellanii str. Neff] | diamond | 2280 | 117 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 29582079 | 29582079 | PRJNA914897_P_NODE_30170_length_287_cov_1.439252_g29746_i0 | PRJNA914897 | 30170 | 287 | 1.439252 | 4.13065324 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 90.1 | 1.28e-20 | NR | XP_004367517.1 | 1257118 | g29746 | i0 | 40.9 | 0.97212543554007 | 93 | 55 | 97.2 | 0 | 2 | 280 | 3 | 95 | XP_004367517.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] | diamond | 279 | 90.1 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 30656409 | 30656409 | PRJNA914897_P_NODE_20213_length_376_cov_4.696370_g19791_i0 | PRJNA914897 | 20213 | 376 | 4.69637 | 17.6583512 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 75.9 | 8.01e-15 | NR | XP_004348703.1 | 1257118 | g19791 | i0 | 32.5 | 1.90691489361702 | 120 | 78 | 93.4 | 1 | 374 | 24 | 3 | 122 | XP_004348703.1 TRM112 family protein [Acanthamoeba castellanii str. Neff] | diamond | 717 | 75.9 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 30719584 | 30719584 | PRJNA914897_P_NODE_20614_length_371_cov_1.889262_g20191_i0 | PRJNA914897 | 20614 | 371 | 1.889262 | 7.00916202 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 69.3 | 8.46e-13 | NR | XP_004337533.1 | 1257118 | g20191 | i0 | 62.5 | 0.388140161725067 | 48 | 18 | 38.8 | 0 | 81 | 224 | 16 | 63 | XP_004337533.1 uncharacterized protein ACA1_163480 [Acanthamoeba castellanii str. Neff] | diamond | 144 | 69.3 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 31193189 | 31193189 | PRJNA914897_P_NODE_12895_length_507_cov_2.135945_g12473_i0 | PRJNA914897 | 12895 | 507 | 2.135945 | 10.82924115 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 112 | 2.51e-28 | NR | XP_004334493.1 | 1257118 | g12473 | i0 | 35.5 | 0.816568047337278 | 138 | 81 | 77.5 | 2 | 98 | 490 | 12 | 148 | XP_004334493.1 uncharacterized protein ACA1_330540 [Acanthamoeba castellanii str. Neff] | diamond | 414 | 112 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 31256791 | 31256791 | PRJNA914897_P_NODE_26875_length_311_cov_1.491597_g26451_i0 | PRJNA914897 | 26875 | 311 | 1.491597 | 4.63886667 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 55.1 | 3.74e-6 | NR | XP_004346007.1 | 1257118 | g26451 | i0 | 30.9 | 0.906752411575563 | 94 | 65 | 90.7 | 0 | 307 | 26 | 29 | 122 | XP_004346007.1 uncharacterized protein ACA1_184090 [Acanthamoeba castellanii str. Neff] | diamond | 282 | 55.1 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 31390856 | 31390856 | PRJNA914897_P_NODE_19676_length_383_cov_1.790323_g19254_i0 | PRJNA914897 | 19676 | 383 | 1.790323 | 6.85693709 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 81.6 | 3.95e-15 | NR | ALV66539.1 | 5755 | g19254 | i0 | 41.1 | 4.5509138381201 | 107 | 63 | 83.8 | 0 | 326 | 6 | 334 | 440 | ALV66539.1 arginine methyltransferase 5 [Acanthamoeba castellanii] | diamond | 1743 | 81.6 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 31889377 | 31889377 | PRJNA914897_P_NODE_41337_length_243_cov_0.905882_g40913_i0 | PRJNA914897 | 41337 | 243 | 0.905882 | 2.20129326 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 74.7 | 2.12e-13 | NR | XP_004338081.1 | 1257118 | g40913 | i0 | 48.8 | 2.96296296296296 | 80 | 41 | 98.8 | 0 | 240 | 1 | 904 | 983 | XP_004338081.1 ABC transporter, ATPbinding domain containing protein [Acanthamoeba castellanii str. Neff] | diamond | 720 | 74.7 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 31889385 | 31889385 | PRJNA914897_P_NODE_8657_length_652_cov_1.651123_g8249_i0 | PRJNA914897 | 8657 | 652 | 1.651123 | 10.76532196 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 146 | 2.1499999999999998e-38 | NR | XP_004333432.1 | 1257118 | g8249 | i0 | 46.1 | 2.25 | 165 | 81 | 72.7 | 3 | 647 | 174 | 187 | 350 | XP_004333432.1 methyltransferase domain containing protein [Acanthamoeba castellanii str. Neff] | diamond | 1467 | 146 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 32364211 | 32364211 | PRJNA914897_P_NODE_29039_length_295_cov_0.851351_g28615_i0 | PRJNA914897 | 29039 | 295 | 0.851351 | 2.51148545 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 113 | 2.88e-27 | NR | XP_004341586.1 | 1257118 | g28615 | i0 | 56.1 | 0.996610169491525 | 98 | 43 | 99.7 | 0 | 295 | 2 | 88 | 185 | XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] | diamond | 294 | 113 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 32813136 | 32813136 | PRJNA914897_P_NODE_40960_length_244_cov_0.900585_g40536_i0 | PRJNA914897 | 40960 | 244 | 0.900585 | 2.1974274 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 71.2 | 2.86e-14 | NR | XP_004353591.1 | 1257118 | g40536 | i0 | 61.7 | 1.47540983606557 | 60 | 23 | 73.8 | 0 | 212 | 33 | 4 | 63 | XP_004353591.1 copper chaperone Atox1, putative [Acanthamoeba castellanii str. Neff] | diamond | 360 | 71.2 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;