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contig_metadata

22 rows where bioproject = "PRJNA914897" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA914897 · 22 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26612828 26612828 PRJNA914897_P_NODE_28701_length_297_cov_1.272321_g28277_i0 PRJNA914897 28701 297 1.272321 3.77879337 Chlamydiota bacterium 2081524 Bacteria Bacteria 50.1 1.75e-4   NR NGX50374.1 2081524 g28277 i0 46.2 1.08080808080808 39 21 39.4 0 230 114 34 72 NGX50374.1 Ribosomal RNA small subunit methyltransferase B [Chlamydiota bacterium] diamond 321 50.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
26968545 26968545 PRJNA914897_P_NODE_3902_length_1013_cov_42.043617_g3615_i0 PRJNA914897 3902 1013 42.043617 425.90184021 root 1 Root_unresolved Root_unresolved 257 2.5399999999999992e-81   NR MCB1084310.1 34094 g3615 i0 74.4 2.25370187561698 172 44 50.9 0 277 792 1 172 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 2283 257 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28951138 28951138 PRJNA914897_P_NODE_12408_length_519_cov_21.183857_g11988_i0 PRJNA914897 12408 519 21.183857 109.94421783 Chlamydiales bacterium 2047757 Bacteria Bacteria 219 3.5600000000000004e-70   NR MCP5470420.1 2047757 g11988 i0 81.6 0.84971098265896 147 26 85 1 511 71 1 146 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 441 219 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29077367 29077367 PRJNA914897_P_NODE_19788_length_382_cov_0.854369_g19366_i0 PRJNA914897 19788 382 0.854369 3.26368958 Chlamydiales bacterium 2047757 Bacteria Bacteria 52 6.54e-5   NR HSW73303.1 2047757 g19366 i0 27.3 0.863874345549738 110 70 78.5 2 78 377 97 206 HSW73303.1 thioredoxin [Chlamydiales bacterium] diamond 330 52 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29519250 29519250 PRJNA914897_P_NODE_5370_length_860_cov_1.850064_g5017_i0 PRJNA914897 5370 860 1.850064 15.9105504 Chlamydiia bacterium 2052156 Bacteria Bacteria 91.7 4.79e-17   NR MCB1180650.1 2052156 g5017 i0 62.7 0.962790697674419 67 25 23.4 0 322 122 259 325 MCB1180650.1 RsmB/NOP family class I SAM-dependent RNA methyltransferase [Chlamydiia bacterium] diamond 828 91.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
29550659 29550659 PRJNA914897_P_NODE_38270_length_248_cov_1.085714_g37846_i0 PRJNA914897 38270 248 1.085714 2.69257072 Candidatus Amphrikana amoebophyrae 3076870 Bacteria Bacteria 59.3 3.96e-8   NR MDN3504671.1 3076870 g37846 i0 50.9 1.39112903225806 57 27 67.7 1 58 225 91 147 MDN3504671.1 glycosyltransferase family 2 protein [Candidatus Amphrikana amoebophyrae] diamond 345 59.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Amphrikana Candidatus Amphrikana amoebophyrae
29582096 29582096 PRJNA914897_P_NODE_8130_length_677_cov_8.374172_g7727_i0 PRJNA914897 8130 677 8.374172 56.69314444 Simkania sp. 34094 Bacteria Bacteria 56.2 9.08e-7   NR MCB1084365.1 34094 g7727 i0 50 0.221565731166913 50 25 22.2 0 110 259 26 75 MCB1084365.1 hypothetical protein [Simkania sp.] diamond 150 56.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
29613616 29613616 PRJNA914897_P_NODE_29750_length_289_cov_4.453704_g29326_i0 PRJNA914897 29750 289 4.453704 12.87120456 Simkania sp. 34094 Bacteria Bacteria 46.2 0.00169   NR MCB1084323.1 34094 g29326 i0 73.9 0.487889273356401 23 6 23.9 0 131 63 91 113 MCB1084323.1 AMP-binding protein [Simkania sp.] diamond 141 46.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
29708296 29708296 PRJNA914897_P_NODE_14230_length_475_cov_25.594527_g13808_i0 PRJNA914897 14230 475 25.594527 121.57400325 Chlamydiales bacterium 2047757 Bacteria Bacteria 223 8.78e-72   NR MCP5470420.1 2047757 g13808 i0 78.8 0.985263157894737 156 33 98.5 0 5 472 1 156 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 468 223 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29779189 29779189 PRJNA914897_P_NODE_41991_length_242_cov_0.911243_g41567_i0 PRJNA914897 41991 242 0.911243 2.20520806 Pseudomonadati 3379134 Bacteria Bacteria 85.9 1.86e-17   NR OGN59706.1 1797601 g41567 i0 56.2 1.82231404958678 73 32 90.5 0 2 220 324 396 OGN59706.1 MAG: hypothetical protein A3F40_04550 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8] diamond 441 85.9 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8
30150685 30150685 PRJNA914897_P_NODE_22872_length_347_cov_1.105839_g22448_i0 PRJNA914897 22872 347 1.105839 3.83726133 Parachlamydia sp. 2052048 Bacteria Bacteria 72.4 9.98e-13   NR MCE2982696.1 2052048 g22448 i0 50.7 4.90201729106628 71 25 57.1 3 149 346 156 221 MCE2982696.1 DNA alkylation repair protein [Parachlamydia sp.] diamond 1701 72.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
30341044 30341044 PRJNA914897_P_NODE_4172_length_980_cov_9.647189_g3870_i0 PRJNA914897 4172 980 9.647189 94.5424522 Simkania sp. 34094 Bacteria Bacteria 256 7.03e-81   NR MCB1084310.1 34094 g3870 i0 73.3 0.52653061224489806 172 46 52.7 0 699 184 1 172 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 516 256 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
31035919 31035919 PRJNA914897_P_NODE_22695_length_348_cov_2.767273_g22271_i0 PRJNA914897 22695 348 2.767273 9.63011004 Chlamydiales bacterium 2047757 Bacteria Bacteria 72 7.77e-14   NR MCP5470423.1 2047757 g22271 i0 81 0.362068965517241 42 8 36.2 0 329 204 1 42 MCP5470423.1 DUF2039 domain-containing protein [Chlamydiales bacterium] diamond 126 72 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
31067379 31067379 PRJNA914897_P_NODE_14675_length_466_cov_1.582697_g14253_i0 PRJNA914897 14675 466 1.582697 7.37536802 Candidatus Amphrikana amoebophyrae 3076870 Bacteria Bacteria 50.4 5.99e-4   NR MDN3504659.1 3076870 g14253 i0 55.3 1.15236051502146 47 18 29.6 2 277 414 50 94 MDN3504659.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae] diamond 537 50.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Amphrikana Candidatus Amphrikana amoebophyrae
31699693 31699693 PRJNA914897_P_NODE_17277_length_417_cov_1.912791_g16855_i0 PRJNA914897 17277 417 1.912791 7.97633847 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 77.4 1.84e-13   NR HSX03456.1 2047756 g16855 i0 51.2 1.26618705035971 84 36 59.7 3 275 27 44 123 HSX03456.1 glycosyltransferase family A protein [Rhabdochlamydiaceae bacterium] diamond 528 77.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31699709 31699709 PRJNA914897_P_NODE_3117_length_1118_cov_9.470813_g2863_i0 PRJNA914897 3117 1118 9.470813 105.88368934 Chlamydiales bacterium SCGC AG-11 2047757 Bacteria Bacteria 48.9 0.0288   NR SCA63082.1 1871324 g2863 i0 30.3 0.238819320214669 89 54 21.7 1 628 870 259 347 SCA63082.1 Uncharacterized protein SCG7109_AH_00380 [Chlamydiales bacterium SCGC AG-110-M15] diamond 267 48.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium SCGC AG-110-M15
32015988 32015988 PRJNA914897_P_NODE_7338_length_720_cov_3.996909_g6947_i0 PRJNA914897 7338 720 3.996909 28.7777448 Parachlamydia sp. 2052048 Bacteria Bacteria 47 0.0441   NR MCE5316929.1 2052048 g6947 i0 57.6 0.1375 33 14 13.8 0 518 420 220 252 MCE5316929.1 C78 family peptidase [Parachlamydia sp.] diamond 99 47 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Parachlamydia Parachlamydia sp.
32174435 32174435 PRJNA914897_P_NODE_36218_length_252_cov_1.625698_g35794_i0 PRJNA914897 36218 252 1.625698 4.09675896 Chlamydiales bacterium 2047757 Bacteria Bacteria 43.5 0.0215   NR MDF2577682.1 2047757 g35794 i0 36.9 0.773809523809524 65 36 75 2 17 205 144 205 MDF2577682.1 hypothetical protein [Chlamydiales bacterium] diamond 195 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32237798 32237798 PRJNA914897_P_NODE_10538_length_577_cov_2.190476_g10120_i0 PRJNA914897 10538 577 2.190476 12.63904652 Simkania sp. 34094 Bacteria Bacteria 68.6 1.88e-10   NR MCB1084431.1 34094 g10120 i0 45.1 0.369150779896014 71 39 36.9 0 413 201 55 125 MCB1084431.1 hypothetical protein [Simkania sp.] diamond 213 68.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
32237808 32237808 PRJNA914897_P_NODE_22158_length_354_cov_1.099644_g21734_i0 PRJNA914897 22158 354 1.099644 3.89273976 Chlamydiales bacterium 2047757 Bacteria Bacteria 69.7 6.2e-13   NR MCP5470428.1 2047757 g21734 i0 47.9 0.601694915254237 71 36 59.3 1 349 140 1 71 MCP5470428.1 hypothetical protein [Chlamydiales bacterium] diamond 213 69.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32743003 32743003 PRJNA914897_P_NODE_15000_length_459_cov_6.971503_g14578_i0 PRJNA914897 15000 459 6.971503 31.99919877 Chlamydiales bacterium 2047757 Bacteria Bacteria 111 7.58e-28   NR MCP5470420.1 2047757 g14578 i0 49.2 1.59477124183007 124 62 80.4 1 459 91 1 124 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 732 111 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32743020 32743020 PRJNA914897_P_NODE_34400_length_263_cov_1.115789_g33976_i0 PRJNA914897 34400 263 1.115789 2.93452507 Simkania sp. 34094 Bacteria Bacteria 70.5 6.49e-13   NR MCB1084323.1 34094 g33976 i0 69 1.6425855513308 42 13 47.9 0 131 256 81 122 MCB1084323.1 AMP-binding protein [Simkania sp.] diamond 432 70.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;