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contig_metadata

33 rows where bioproject = "PRJNA914897", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 33 ✖

tax_phylum 1

  • Acidobacteriota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA914897 · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2170208 2170208 PRJNA914897_P_NODE_18802_length_395_cov_1.347826_g18380_i0 PRJNA914897 18802 395 1.347826 5.3239127 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 606 6.429999999999998e-169   NTclustered gi|2874253862|emb|OY969918.1| 171953 g18380 i0 94.43 102.681012658228 395 21 100 1 1 395 2908273 2907880 MAG: uncultured Acidobacteriota bacterium isolate MFD04967.bin.c.4 genome assembly, chromosome: 1 blastn 40559 606 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
3445728 3445728 PRJNA914897_P_NODE_28283_length_300_cov_1.356828_g27859_i0 PRJNA914897 28283 300 1.356828 4.070484 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 472 1.81e-128   NTclustered gi|31789363|gb|AY281352.1| 171953 g27859 i0 95 103.86 300 15 100 0 1 300 3620 3321 Uncultured Acidobacteria bacterium clone 23k22 genomic sequence blastn 31158 472 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
8547790 8547790 PRJNA914897_P_NODE_21827_length_358_cov_0.978947_g21403_i0 PRJNA914897 21827 358 0.978947 3.50463026 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 52.8 0.034   NTclustered gi|2874253713|emb|OY969555.1| 171953 g21403 i0 100 0.0782122905027933 28 0 8 0 309 336 3383810 3383837 MAG: uncultured Acidobacteriota bacterium isolate MFD02248.bin.1.120 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
11454778 11454778 PRJNA914897_P_NODE_27149_length_309_cov_1.292373_g26725_i0 PRJNA914897 27149 309 1.292373 3.99343257 Bacteria 2 Bacteria Bacteria 202 2.71e-47   NTclustered gi|1015624362|gb|AH012920.2| 171953 g26725 i0 88.554 63.8090614886731 166 19 54 0 82 247 30170 30335 Uncultured Acidobacteria bacterium clone 46h5 hypothetical protein, putative O-linked GlcNAc transferase, putative two-component response regulator, hypothetical protein, putative penicillin-resistance DD-carboxypeptidase, putative glycosyl transferase, hypothetical protein, conserved hypothetical protein, hypothetical protein, putative MaoC family dehydratase, putative D-3-phosphoglycerate dehydrogenase, putative magnesium and cobalt transport protein, putative phosphatidyl-glycerophosphatase, putative 2-methylthioadenine synthetase, hypothetical protein, putative glutamine cyclotransferase, and hypothetical protein genes, complete cds; 5S ribosomal RNA, 23S ribosomal RNA, tRNA-Ala, tRNA-Met, tRNA-Ile, and 16S ribosomal RNA genes, complete sequence; and hypothetical protein genes, complete cds blastn 19717 202 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
23847158 23847158 PRJNA914897_P_NODE_27619_length_305_cov_1.991379_g27195_i0 PRJNA914897 27619 305 1.991379 6.07370595 Luteitalea pratensis 1855912 Bacteria Bacteria 56.5 0.002   NTclustered gi|1016914409|gb|CP015136.1| 1855912 g27195 i0 89.13 0.150819672131148 46 3 15 2 77 121 5559289 5559333 Luteitalea pratensis strain DSM 100886 chromosome, complete genome blastn 46 56.5 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea pratensis
26612835 26612835 PRJNA914897_P_NODE_32981_length_271_cov_1.338384_g32557_i0 PRJNA914897 32981 271 1.338384 3.62702064 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 171 1.5799999999999998e-47   NR HEX5965501.1 2283092 g32557 i0 97.8 10.8376383763838 89 2 98.5 0 3 269 542 630 HEX5965501.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 2937 171 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26739185 26739185 PRJNA914897_P_NODE_1321_length_1529_cov_6.225275_g1184_i0 PRJNA914897 1321 1529 6.225275 95.18445475 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 90.9 2.12e-16   NR HWS99134.1 2283092 g1184 i0 39.7 0.621975147155003 156 89 30.6 3 1529 1062 84 234 HWS99134.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 951 90.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27498626 27498626 PRJNA914897_P_NODE_20783_length_369_cov_2.097973_g20360_i0 PRJNA914897 20783 369 2.097973 7.74152037 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 112 3.17e-27   NR HRC88013.1 2651171 g20360 i0 58.5 0.861788617886179 106 44 86.2 0 320 3 29 134 HRC88013.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 318 112 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27656578 27656578 PRJNA914897_P_NODE_26944_length_310_cov_3.510549_g26520_i0 PRJNA914897 26944 310 3.510549 10.8827019 Bryobacterales bacterium 2026791 Bacteria Bacteria 139 2.66e-38   NR MBL8236175.1 2026791 g26520 i0 63.6 5.80645161290323 99 36 95.8 0 7 303 6 104 MBL8236175.1 hypothetical protein [Bryobacterales bacterium] diamond 1800 139 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
27814505 27814505 PRJNA914897_P_NODE_33064_length_271_cov_0.974747_g32640_i0 PRJNA914897 33064 271 0.974747 2.64156437 Acidobacteriota bacterium 1978231 Bacteria Bacteria 44.7 0.0105   NR MBX3294083.1 1978231 g32640 i0 32.9 1.72693726937269 76 51 84.1 0 30 257 120 195 MBX3294083.1 hypothetical protein [Acidobacteriota bacterium] diamond 468 44.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27979522 27979522 PRJNA914897_P_NODE_2505_length_1230_cov_1.824546_g2290_i0 PRJNA914897 2505 1230 1.824546 22.4419158 root 1 Root_unresolved Root_unresolved 115 1.29e-23   NR MEN8153019.1 1978231 g2290 i0 29.3 2.81463414634146 300 189 72.9 8 956 60 30 307 MEN8153019.1 protein kinase [Acidobacteriota bacterium] diamond 3462 115 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28698546 28698546 PRJNA914897_P_NODE_7787_length_696_cov_1.730337_g7388_i0 PRJNA914897 7787 696 1.730337 12.04314552 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 60.5 1.41e-6   NR MFL6209098.1 2283092 g7388 i0 29.2 5.69827586206897 216 130 86.2 8 94 693 19 227 MFL6209098.1 ATP-dependent zinc metalloprotease FtsH [Pyrinomonadaceae bacterium] diamond 3966 60.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
28698550 28698550 PRJNA914897_P_NODE_9587_length_614_cov_2.334566_g9172_i0 PRJNA914897 9587 614 2.334566 14.33423524 Acidobacteriota bacterium 1978231 Bacteria Bacteria 137 8.23e-38   NR MDQ7008653.1 1978231 g9172 i0 74.8 0.503257328990228 103 26 50.3 0 90 398 8 110 MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] diamond 309 137 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29148115 29148115 PRJNA914897_P_NODE_28889_length_295_cov_3.049550_g28465_i0 PRJNA914897 28889 295 3.04955 8.9961725 Bacteria 2 Bacteria Bacteria 120 7.6e-31   NR ODS53960.1 1660160 g28465 i0 66.3 1.84067796610169 89 29 90.5 1 293 27 205 292 ODS53960.1 MAG: oxidoreductase [Acidobacteria bacterium SCN 69-37] diamond 543 120 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium SCN 69-37
29172085 29172085 PRJNA914897_P_NODE_14449_length_470_cov_5.909320_g14027_i0 PRJNA914897 14449 470 5.90932 27.773804 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 77.4 1.11e-14   NR MEO7274061.1 2910147 g14027 i0 41.8 1.16808510638298 91 52 57.4 1 343 74 44 134 MEO7274061.1 thioredoxin [Vicinamibacterales bacterium] diamond 549 77.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30055989 30055989 PRJNA914897_P_NODE_1591_length_1445_cov_9.193149_g1434_i0 PRJNA914897 1591 1445 9.193149 132.84100305 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.3 1.62e-5   NR MBS1873370.1 1978231 g1434 i0 33.6 0.552249134948097 125 61 25.3 5 435 70 112 217 MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] diamond 798 59.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30182481 30182481 PRJNA914897_P_NODE_38492_length_248_cov_0.880000_g38068_i0 PRJNA914897 38492 248 0.88 2.1824 Acidobacteriota bacterium 1978231 Bacteria Bacteria 126 4.06e-32   NR PYS30938.1 1978231 g38068 i0 77.4 1.01612903225806 84 17 99.2 1 1 246 189 272 PYS30938.1 MAG: IS91 family transposase [Acidobacteriota bacterium] diamond 252 126 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30285060 30285060 PRJNA914897_P_NODE_10832_length_566_cov_5.060852_g10413_i0 PRJNA914897 10832 566 5.060852 28.64442232 Pseudomonadati 3379134 Bacteria Bacteria 77.8 4.04e-14   NR HSK74132.1 2283092 g10413 i0 63 1.97703180212014 54 19 28.1 1 49 207 13 66 HSK74132.1 HD domain-containing protein [Pyrinomonadaceae bacterium] diamond 1119 77.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30758655 30758655 PRJNA914897_P_NODE_35754_length_255_cov_1.269231_g35330_i0 PRJNA914897 35754 255 1.269231 3.23653905 Bacteria 2 Bacteria Bacteria 49.7 1.45e-4   NR MBE3132903.1 1978231 g35330 i0 36.5 1.91764705882353 85 50 95.3 2 254 12 64 148 MBE3132903.1 GNAT family N-acetyltransferase [Acidobacteriota bacterium] diamond 489 50.1 0.992015968063872 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30790176 30790176 PRJNA914897_P_NODE_16354_length_433_cov_1.061111_g15932_i0 PRJNA914897 16354 433 1.061111 4.59461063 Candidatus Coneutiohabitans 3396485 Bacteria Bacteria 72.4 2.04e-12   NR MEK7724577.1 1978231 g15932 i0 43.3 3.18706697459584 104 52 70.7 3 427 122 94 192 MEK7724577.1 CAP domain-containing protein [Acidobacteriota bacterium] diamond 1380 72.8 0.994505494505495 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31161703 31161703 PRJNA914897_P_NODE_3575_length_1055_cov_2.207739_g3301_i0 PRJNA914897 3575 1055 2.207739 23.291646449999998 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 207 8.86e-61   NR MEX2262386.1 2212468 g3301 i0 40.8 5.59905213270142 272 153 77.1 4 824 12 40 304 MEX2262386.1 D-2-hydroxyacid dehydrogenase [Bryobacteraceae bacterium] diamond 5907 207 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31351824 31351824 PRJNA914897_P_NODE_9756_length_607_cov_2.153558_g9341_i0 PRJNA914897 9756 607 2.153558 13.07209706 Terriglobales bacterium 2282142 Bacteria Bacteria 78.6 2.77e-13   NR HXM08509.1 2282142 g9341 i0 26.1 3.78088962108731 199 130 94.4 5 13 585 131 320 HXM08509.1 alpha/beta fold hydrolase [Terriglobales bacterium] diamond 2295 78.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
31731138 31731138 PRJNA914897_P_NODE_25537_length_322_cov_1.622490_g25113_i0 PRJNA914897 25537 322 1.62249 5.2244178 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 44.7 0.0166   NR MBY0505171.1 2212468 g25113 i0 34 0.903726708074534 97 57 85.7 2 45 320 51 145 MBY0505171.1 Nif3-like dinuclear metal center hexameric protein [Bryobacteraceae bacterium] diamond 291 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
31762857 31762857 PRJNA914897_P_NODE_30457_length_286_cov_1.051643_g30033_i0 PRJNA914897 30457 286 1.051643 3.00769898 Blastocatellia bacterium 2052146 Bacteria Bacteria 50.4 1.12e-4   NR HKQ76902.1 2052146 g30033 i0 42.9 2.05594405594406 63 34 66.1 1 90 278 10 70 HKQ76902.1 molecular chaperone DnaJ [Blastocatellia bacterium] diamond 588 50.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
31889379 31889379 PRJNA914897_P_NODE_4637_length_932_cov_2.694994_g4315_i0 PRJNA914897 4637 932 2.694994 25.11734408 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 48.5 0.0319   NR MCL4854845.1 2212468 g4315 i0 31.4 0.276824034334764 86 59 27.7 0 354 611 506 591 MCL4854845.1 PQQ-binding-like beta-propeller repeat protein [Bryobacteraceae bacterium] diamond 258 48.5 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
32015986 32015986 PRJNA914897_P_NODE_6018_length_808_cov_2.854422_g5656_i0 PRJNA914897 6018 808 2.854422 23.06372976 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 70.5 3.35e-10   NR HEX8143179.1 2283092 g5656 i0 31.6 1.1509900990099 155 94 54.6 3 367 807 61 211 HEX8143179.1 CAP domain-containing protein [Pyrinomonadaceae bacterium] diamond 930 70.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32079258 32079258 PRJNA914897_P_NODE_8838_length_644_cov_3.495622_g8427_i0 PRJNA914897 8838 644 3.495622 22.51180568 Acidobacteriota bacterium 1978231 Bacteria Bacteria 103 1.26e-22   NR MDY7095910.1 1978231 g8427 i0 34.9 1.43944099378882 169 95 77.3 5 2 499 56 212 MDY7095910.1 S1/P1 nuclease [Acidobacteriota bacterium] diamond 927 103 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32110999 32110999 PRJNA914897_P_NODE_7418_length_716_cov_2.405910_g7025_i0 PRJNA914897 7418 716 2.40591 17.2263156 Acidobacteriota bacterium 1978231 Bacteria Bacteria 116 7.700000000000001e-28   NR MBS1840976.1 1978231 g7025 i0 36.1 1.60474860335196 191 114 79.6 4 714 145 44 227 MBS1840976.1 MIP family channel protein [Acidobacteriota bacterium] diamond 1149 116 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32118409 32118409 PRJNA914897_P_NODE_23418_length_341_cov_1.432836_g22994_i0 PRJNA914897 23418 341 1.432836 4.88597076 Bacteria 2 Bacteria Bacteria 148 1.57e-41   NR MBZ5675593.1 2081523 g22994 i0 65.2 9.83577712609971 112 35 98.5 1 337 2 109 216 MBZ5675593.1 hypothetical protein [Terriglobia bacterium] diamond 3354 148 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32142656 32142656 PRJNA914897_P_NODE_8878_length_642_cov_2.604569_g8466_i0 PRJNA914897 8878 642 2.604569 16.72133298 Acidobacteriota bacterium 1978231 Bacteria Bacteria 54.3 6.61e-5   NR MBS1789862.1 1978231 g8466 i0 31.3 0.747663551401869 160 102 74.3 2 588 112 76 228 MBS1789862.1 TVP38/TMEM64 family protein [Acidobacteriota bacterium] diamond 480 54.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32332737 32332737 PRJNA914897_P_NODE_12959_length_506_cov_1.094688_g12537_i0 PRJNA914897 12959 506 1.094688 5.53912128 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 145 2.95e-39   NR HRC88013.1 2651171 g12537 i0 67.3 0.616600790513834 104 34 61.7 0 506 195 171 274 HRC88013.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 312 145 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
32427391 32427391 PRJNA914897_P_NODE_23039_length_345_cov_1.132353_g22615_i0 PRJNA914897 23039 345 1.132353 3.90661785 Acidobacteriota bacterium 1978231 Bacteria Bacteria 75.9 2.75e-13   NR HBL27471.1 1978231 g22615 i0 36.4 0.930434782608696 107 65 91.3 3 20 334 1 106 HBL27471.1 hypothetical protein [Acidobacteriota bacterium] diamond 321 75.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32743016 32743016 PRJNA914897_P_NODE_32020_length_277_cov_1.122549_g31596_i0 PRJNA914897 32020 277 1.122549 3.10946073 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 42.7 0.0313   NR HOK46570.1 2212468 g31596 i0 48 1.08303249097473 50 21 53.1 2 123 269 15 60 HOK46570.1 aldolase/citrate lyase family protein [Bryobacteraceae bacterium] diamond 300 42.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;