RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA914897", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 8 ✖

tax_kingdom 1

  • Bacillati · 8 ✖

bioproject 1

  • PRJNA914897 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3445915 3445915 PRJNA914897_P_NODE_6823_length_751_cov_4.584071_g5266_i1 PRJNA914897 6823 751 4.584071 34.42637321 Bacteria 2 Bacteria Bacteria 114 1.02e-26   NR MBS1716519.1 2033014 g5266 i1 38.6 4.47003994673768 176 94 68.7 7 233 748 57 222 MBS1716519.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Armatimonadota bacterium] diamond 3357 114 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
6355075 6355075 PRJNA914897_P_NODE_38705_length_248_cov_0.880000_g38281_i0 PRJNA914897 38705 248 0.88 2.1824 Armatimonadota 67819 Bacteria Bacteria 296 9.39e-76   NTclustered gi|663071213|gb|CP007139.1| 661478 g38281 i0 88.259 239.943548387097 247 29 99 0 2 248 27463 27709 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 59506 296 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
9822947 9822947 PRJNA914897_P_NODE_8028_length_682_cov_52.527094_g7627_i0 PRJNA914897 8028 682 52.527094 358.23478108 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 177 4.1e-52   NR MEJ5169988.1 2682145 g7627 i0 57 0.664222873900293 151 61 66 3 545 96 32 179 MEJ5169988.1 glutathione peroxidase [Fimbriimonadales bacterium] diamond 453 177 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
12730449 12730449 PRJNA914897_P_NODE_32110_length_276_cov_1.487685_g31686_i0 PRJNA914897 32110 276 1.487685 4.1060106 Candidatus Nitrosymbiomonas 2819028 Bacteria Bacteria 281 2.97e-71   NTclustered gi|1996217993|dbj|AP021858.1| 2608984 g31686 i0 87.2 221.018115942029 250 29 90 3 2 249 37378 37130 Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome blastn 61001 281 1 Bacteria   Bacillati Armatimonadota       Candidatus Nitrosymbiomonas Candidatus Nitrosymbiomonas proteolyticus
26929644 26929644 PRJNA914897_P_NODE_18102_length_405_cov_1.768072_g17680_i0 PRJNA914897 18102 405 1.768072 7.1606916 Armatimonadetes bacterium RBG_16_67_12 1797288 Bacteria Bacteria 75.5 1.33e-13   NR OFX30031.1 1797288 g17680 i0 39.3 0.866666666666667 117 65 85.2 2 367 23 12 124 OFX30031.1 MAG: aquaporin [Armatimonadetes bacterium RBG_16_67_12] diamond 351 75.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium RBG_16_67_12
29140612 29140612 PRJNA914897_P_NODE_2669_length_1197_cov_5.044484_g2443_i0 PRJNA914897 2669 1197 5.044484 60.38247348 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 88.2 6.37e-15   NR MCW5937656.1 2682144 g2443 i0 34.2 0.556390977443609 222 125 52.6 9 111 740 15 227 MCW5937656.1 HDIG domain-containing protein [Fimbriimonadaceae bacterium] diamond 666 88.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30000452 30000452 PRJNA914897_P_NODE_19911_length_380_cov_1.254072_g19489_i0 PRJNA914897 19911 380 1.254072 4.7654736 Fimbriimonas 1005038 Bacteria Bacteria 86.3 9.2e-17   NR HLO98883.1 1936159 g19489 i0 53.3 6.63947368421053 60 28 47.4 0 247 68 309 368 HLO98883.1 phosphoenolpyruvate carboxykinase (ATP) [Fimbriimonas sp.] diamond 2523 86.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31541620 31541620 PRJNA914897_P_NODE_39196_length_247_cov_0.885057_g38772_i0 PRJNA914897 39196 247 0.885057 2.18609079 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 44.7 0.00795   NR MFN7018071.1 2682145 g38772 i0 35.2 0.65587044534413 54 35 65.6 0 21 182 289 342 MFN7018071.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase [Fimbriimonadales bacterium] diamond 162 44.7 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;