RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA914897", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA914897 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9822941 9822941 PRJNA914897_P_NODE_7308_length_722_cov_2.605547_g6917_i0 PRJNA914897 7308 722 2.605547 18.81204934 Methanosphaerula palustris 475088 Archaea Archaea 58.4 0.002   NTclustered gi|219544946|gb|CP001338.1| 521011 g6917 i0 97.059 0.0470914127423823 34 1 5 0 673 706 936128 936161 Methanosphaerula palustris E1-9c chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanosphaerula Methanosphaerula palustris
29329796 29329796 PRJNA914897_P_NODE_229_length_2660_cov_10.045613_g192_i0 PRJNA914897 229 2660 10.045613 267.2133058 Methanoregulaceae archaeon 2485498 Archaea Archaea 69.3 6.59e-8   NR HNJ81026.1 2485498 g192 i0 53.3 0.841353383458647 60 26 6.8 1 799 620 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 2238 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
31130059 31130059 PRJNA914897_P_NODE_23415_length_341_cov_1.436567_g22991_i0 PRJNA914897 23415 341 1.436567 4.89869347 Methanocorpusculum sp. 2058474 Archaea Archaea 69.3 1.41e-11   NR MDO5844305.1 2058474 g22991 i0 36.8 1.7683284457478 106 67 93.3 0 337 20 111 216 MDO5844305.1 MIP/aquaporin family protein [Methanocorpusculum sp.] diamond 603 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
32110984 32110984 PRJNA914897_P_NODE_2998_length_1141_cov_11.198502_g192_i1 PRJNA914897 2998 1141 11.198502 127.77490782 Methanoregulaceae archaeon 2485498 Archaea Archaea 69.3 1.16e-8   NR HNJ81026.1 2485498 g192 i1 53.3 0.157756354075372 60 26 15.8 1 799 620 603 660 HNJ81026.1 Ig-like domain-containing protein [Methanoregulaceae archaeon] diamond 180 69.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;