RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA914897", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA914897 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28192957 28192957 PRJNA914897_P_NODE_42826_length_241_cov_0.916667_g42402_i0 PRJNA914897 42826 241 0.916667 2.20916747 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 84.7 5.93e-18   NR ETO31202.1 46433 g42402 i0 59.7 0.95850622406639 77 31 95.9 0 11 241 102 178 ETO31202.1 Band 7 protein [Reticulomyxa filosa] diamond 231 84.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30404165 30404165 PRJNA914897_P_NODE_41693_length_242_cov_1.946746_g41269_i0 PRJNA914897 41693 242 1.946746 4.71112532 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 65.9 2.65e-10   NR ETO08110.1 46433 g41269 i0 48.5 0.84297520661157 68 34 84.3 1 2 205 480 546 ETO08110.1 hypothetical protein RFI_29276 [Reticulomyxa filosa] diamond 204 65.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30782835 30782835 PRJNA914897_P_NODE_40854_length_244_cov_0.900585_g40430_i0 PRJNA914897 40854 244 0.900585 2.1974274 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 64.7 6.76e-10   NR ETO16724.1 46433 g40430 i0 34.6 1.99180327868852 81 53 99.6 0 243 1 4 84 ETO16724.1 hypothetical protein RFI_20614 [Reticulomyxa filosa] diamond 486 64.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32269311 32269311 PRJNA914897_P_NODE_2218_length_1289_cov_2.111020_g2016_i0 PRJNA914897 2218 1289 2.11102 27.2110478 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 68.2 4.52e-8   NR ETO08110.1 46433 g2016 i0 53.1 0.148952676493406 64 29 14.9 1 1242 1051 471 533 ETO08110.1 hypothetical protein RFI_29276 [Reticulomyxa filosa] diamond 192 68.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;