RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA914897", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32015963 32015963 PRJNA914897_P_NODE_2478_length_1234_cov_2.480620_g2263_i0 PRJNA914897 2478 1234 2.48062 30.6108508 Pontiellaceae bacterium 2813032 Bacteria Bacteria 219 2.83e-63   NR MBN2162857.1 2813032 g2263 i0 37.3 4.93760129659643 413 212 97.2 12 35 1234 4 382 MBN2162857.1 FAD-dependent oxidoreductase [Pontiellaceae bacterium] diamond 6093 219 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae   Pontiellaceae bacterium
32395768 32395768 PRJNA914897_P_NODE_28859_length_296_cov_1.035874_g28435_i0 PRJNA914897 28859 296 1.035874 3.06618704 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 76.6 5.91e-14   NR HMP89913.1 2212473 g28435 i0 64.8 3.83108108108108 54 19 54.7 0 294 133 107 160 HMP89913.1 chorismate synthase [Kiritimatiellia bacterium] diamond 1134 76.6 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;