RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA914897", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA914897 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1251036 1251036 PRJNA914897_P_NODE_41881_length_242_cov_0.911243_g41457_i0 PRJNA914897 41881 242 0.911243 2.20520806 Rhodothermales 1853224 Bacteria Bacteria 296 9.12e-76   NTclustered gi|1167574847|gb|CP020382.1| 1779382 g41457 i0 88.934 176.847107438017 244 21 99 6 2 242 2905352 2905592 Rhodothermaceae bacterium RA chromosome, complete genome blastn 42797 296 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rhodothermaceae   Rhodothermaceae bacterium RA
2170335 2170335 PRJNA914897_P_NODE_35042_length_259_cov_1.241935_g34618_i0 PRJNA914897 35042 259 1.241935 3.21661165 Rhodothermales bacterium 2306054 Bacteria Bacteria 281 2.76e-71   NTclustered gi|2893358387|emb|OZ220707.1| 2306054 g34618 i0 87.917 187.772200772201 240 27 92 2 1 239 1910122 1910360 MAG: Rhodothermales bacterium isolate 73463979-71cf-475a-bf3e-fc0c682d52d1 genome assembly, chromosome: 1 blastn 48633 281 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;